RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TXNDC15Q96J42 360 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 ACOXLQ9NUZ1 547 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 LUZP4Q9P127 313 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 CEP250Q9BV73 2442 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 LAP3P28838 519 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 MTNR1BP49286 362 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 HCCSP53701 268 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 PLPP5Q8NEB5 264 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
CTR9-201ENST00000361367 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 TRDV1A0A1B0GX56 115 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 A0A1W2PS29 197 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 SLC22A20A6NK97 555 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 DVL2O14641 736 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 FUCA1P04066 466 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 ETV5P41161 510 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 GABRA2P47869 451 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 ETV1P50549 477 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 ZNF766Q5HY98 468 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 CMTM1Q8IZ96 169 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 ASCC1Q8N9N2 400 aaKnown RBP12.59□□□□□ -0.39
CTR9-201ENST00000361367 C3orf49Q96BT1 292 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 SLAMF6Q96DU3 332 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 MRPS28Q9Y2Q9 187 aaKnown RBP12.59□□□□□ -0.39
CTR9-201ENST00000361367 TIMM10BQ9Y5J6 103 aa12.59□□□□□ -0.39
CTR9-201ENST00000361367 PIGBOS1A0A0B4J2F0 54 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 ZSCAN5BA6NJL1 495 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 CYR61O00622 381 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 UPK1BO75841 260 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 TOXO94900 526 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTR9-201ENST00000361367 SFXN4Q6P4A7 337 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 GALNT16Q8N428 558 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 GPR87Q9BY21 358 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 LANCL2Q9NS86 450 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 PROCRQ9UNN8 238 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 PCYT1BQ9Y5K3 369 aaPredicted RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 AKAIN1P0CW23 69 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 HLA-DMAP28067 261 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 CXADRP78310 365 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 BHLHE23Q8NDY6 225 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 ZNF700Q9H0M5 742 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 SLC6A15Q9H2J7 730 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 CRLF2Q9HC73 371 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 KCNN3Q9UGI6 736 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 NPIPB8E9PQR5 432 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 SURF4O15260 269 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 CRYABP02511 175 aaKnown RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 ZNF93P35789 620 aaPredicted RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 CX3CR1P49238 355 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 ZNF74Q16587 644 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 EXOSC6Q5RKV6 272 aaKnown RBP12.58□□□□□ -0.4
CTR9-201ENST00000361367 SLC25A45Q8N413 288 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 SLC22A24Q8N4F4 322 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 HINT2Q9BX68 163 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 ZFP64Q9NPA5 681 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 PTPRFP10586 1907 aa12.58□□□□□ -0.4
CTR9-201ENST00000361367 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 LINC01387J3KSC0 135 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 PNLIPP16233 465 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 MECP2P51608 486 aaKnown RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 CLDN22Q8N7P3 220 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 CCDC71LQ8N9Z2 235 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 NUBPLQ8TB37 319 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 CMSS1Q9BQ75 279 aaKnown RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 DUSP21Q9H596 190 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 CACNG2Q9Y698 323 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 A0A096LPE4 126 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 A0A1W2PPZ6 126 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 DHHO43323 396 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 ZNF254O75437 659 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 ACTL6BO94805 426 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 IFNA7P01567 189 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 VEGFCP49767 419 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 MYBPHQ13203 477 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 RTL6Q6ICC9 239 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.57□□□□□ -0.4
CTR9-201ENST00000361367 BEST3Q8N1M1 668 aa12.57□□□□□ -0.4
CTR9-201ENST00000361367 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms