RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 OR1J4Q8NGS1 313 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 ANGPTL6Q8NI99 470 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 STK35Q8TDR2 534 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 LIPHQ8WWY8 451 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 PHYHIPQ92561 330 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 NTNG2Q96CW9 530 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 KTI12Q96EK9 354 aaPredicted RBP11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 ZCCHC4Q9H5U6 513 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 ST6GALNAC2Q9UJ37 374 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 FBXL2Q9UKC9 423 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 CAMK2AQ9UQM7 478 aa11.83□□□□□ -0.52
SQSTM1-201ENST00000360718 DMXL2Q8TDJ6 3036 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 ANKRD61A6NGH8 418 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 AHSA1O95433 338 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 TCRBP04435 133 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 EIF1P41567 113 aaKnown RBP11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 DLX5P56178 289 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 FHL1Q13642 323 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 FAM205BPQ63HN1 556 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 CDH24Q86UP0 819 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 FADS6Q8N9I5 356 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 OR52E2Q8NGJ4 325 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 OR5J2Q8NH18 312 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 RELTQ969Z4 430 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 MED30Q96HR3 178 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 JSRP1Q96MG2 331 aaPredicted RBP11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 CNN2Q99439 309 aaKnown RBP11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 ACTR6Q9GZN1 396 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 GHITMQ9H3K2 345 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 MCCC2Q9HCC0 563 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A087WZY1 265 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TEX13CA0A0J9YWL9 993 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1W2PRG6 482 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TMEM72A0PK05 275 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SHISA8B8ZZ34 492 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 FABP7O15540 132 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TPD52L2O43399 206 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 AKR7A2O43488 359 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 OR2T1O43869 369 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 MT-ATP6P00846 226 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TFPIP10646 304 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 CLUP10909 449 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ANXA3P12429 323 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 GDI2P50395 445 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 FOXF1Q12946 379 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 FCN2Q15485 313 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 PLPPR5Q32ZL2 321 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC36A2Q495M3 483 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC25A53Q5H9E4 307 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 C1orf140Q5VVS0 124 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 LAMTOR1Q6IAA8 161 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 RPL22L1Q6P5R6 122 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 RPTNQ6XPR3 784 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 DTX3Q8N9I9 347 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SNX33Q8WV41 574 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TAAR8Q969N4 342 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SMIM19Q96E16 107 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 UTP23Q9BRU9 249 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF275Q9NSD4 429 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 LRFN1Q9P244 771 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF222Q9UK12 451 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1B0GVC2 190 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 A6NIN4 97 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 BLOC1S5-TXNDC5H3BN57 136 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ETV2O00321 342 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 CTDSPLO15194 276 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF208O43345 1280 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TMEM127O75204 238 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 EPXP11678 715 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SNRPD2P62316 118 aaKnown RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 SIRPAP78324 504 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 FOXK1P85037 733 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 RIPPLY1Q0D2K3 151 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 CDK5R1Q15078 307 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 PON3Q15166 354 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 CCDC58Q4VC31 144 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 FAM69AQ5T7M9 428 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 C1QL3Q5VWW1 255 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 LYPD4Q6UWN0 246 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 GALNT16Q8N428 558 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF431Q8TF32 576 aaPredicted RBP11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 ZBTB8AQ96BR9 441 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 TMEM41AQ96HV5 264 aa11.81□□□□□ -0.52
SQSTM1-201ENST00000360718 MOGAT1Q96PD6 335 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms