RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MPGP29372 298 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SPANXN5Q5MJ07 72 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 GLCCI1Q86VQ1 547 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 BPIFB2Q8N4F0 458 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 WDTC1Q8N5D0 677 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 SIMC1Q8NDZ2 872 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 CHDHQ8NE62 594 aaPredicted RBP9.01□□□□□ -0.97
CHD3-202ENST00000358181 GJC3Q8NFK1 279 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 COQ4Q9Y3A0 265 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 TEX264Q9Y6I9 313 aa9.01□□□□□ -0.97
CHD3-202ENST00000358181 FAM159BA6NKW6 160 aa9□□□□□ -0.97
CHD3-202ENST00000358181 PNPP00491 289 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF865P0CJ78 1059 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 NUDT1P36639 197 aa9□□□□□ -0.97
CHD3-202ENST00000358181 MFAP5Q13361 173 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SPHARQ15513 63 aa9□□□□□ -0.97
CHD3-202ENST00000358181 PNCKQ6P2M8 343 aa9□□□□□ -0.97
CHD3-202ENST00000358181 FBXO46Q6PJ61 603 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 Q6ZTK2 550 aa9□□□□□ -0.97
CHD3-202ENST00000358181 GALNT16Q8N428 558 aa9□□□□□ -0.97
CHD3-202ENST00000358181 OR10V1Q8NGI7 309 aa9□□□□□ -0.97
CHD3-202ENST00000358181 A0A1W2PQL4 384 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 FAM183AA6NL82 134 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SH2D1BO14796 132 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF749O43361 778 aa9□□□□□ -0.97
CHD3-202ENST00000358181 PLRG1O43660 514 aaKnown RBP9□□□□□ -0.97
CHD3-202ENST00000358181 SNAP29O95721 258 aa9□□□□□ -0.97
CHD3-202ENST00000358181 BPIFB3P59826 476 aa9□□□□□ -0.97
CHD3-202ENST00000358181 GPR19Q15760 415 aa9□□□□□ -0.97
CHD3-202ENST00000358181 WBP2NLQ6ICG8 309 aa9□□□□□ -0.97
CHD3-202ENST00000358181 CD300LGQ6UXG3 332 aa9□□□□□ -0.97
CHD3-202ENST00000358181 DVL3Q92997 716 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 COMMD5Q9GZQ3 224 aa9□□□□□ -0.97
CHD3-202ENST00000358181 AAMDCQ9H7C9 122 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF391Q9UJN7 358 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ABCC6O95255 1503 aa9□□□□□ -0.97
CHD3-202ENST00000358181 H7C2G1 150 aa9□□□□□ -0.97
CHD3-202ENST00000358181 CDX4O14627 284 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 SLC10A3P09131 477 aa9□□□□□ -0.97
CHD3-202ENST00000358181 IMPA1P29218 277 aa9□□□□□ -0.97
CHD3-202ENST00000358181 LRRC10Q5BKY1 277 aa9□□□□□ -0.97
CHD3-202ENST00000358181 C17orf78Q8N4C9 275 aa9□□□□□ -0.97
CHD3-202ENST00000358181 OR10K1Q8NGX5 313 aa9□□□□□ -0.97
CHD3-202ENST00000358181 TLCD1Q96CP7 247 aa9□□□□□ -0.97
CHD3-202ENST00000358181 NPY6RQ99463 290 aa9□□□□□ -0.97
CHD3-202ENST00000358181 YKT6O15498 198 aa9□□□□□ -0.97
CHD3-202ENST00000358181 EGFP01133 1207 aa9□□□□□ -0.97
CHD3-202ENST00000358181 MAP2K6P52564 334 aa9□□□□□ -0.97
CHD3-202ENST00000358181 CLDN12P56749 244 aa9□□□□□ -0.97
CHD3-202ENST00000358181 GALNT2Q10471 571 aa9□□□□□ -0.97
CHD3-202ENST00000358181 PAFAH1B3Q15102 231 aaKnown RBP9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF417Q8TAU3 575 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
CHD3-202ENST00000358181 NIPAL2Q9H841 368 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SLC22A11Q9NSA0 550 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF701M0R085 212 aaPredicted RBP9□□□□□ -0.97
CHD3-202ENST00000358181 GFRA2O00451 464 aa9□□□□□ -0.97
CHD3-202ENST00000358181 GUSBP08236 651 aa9□□□□□ -0.97
CHD3-202ENST00000358181 CSF3P09919 207 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZDHHC11BP0C7U3 371 aa9□□□□□ -0.97
CHD3-202ENST00000358181 CNR2P34972 360 aa9□□□□□ -0.97
CHD3-202ENST00000358181 OR3A4PP47883 348 aa9□□□□□ -0.97
CHD3-202ENST00000358181 TAGLNQ01995 201 aaKnown RBP9□□□□□ -0.97
CHD3-202ENST00000358181 MEF2DQ14814 521 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ETFRF1Q6IPR1 90 aa9□□□□□ -0.97
CHD3-202ENST00000358181 C19orf47Q8N9M1 422 aaKnown RBP9□□□□□ -0.97
CHD3-202ENST00000358181 CCL17Q92583 94 aa9□□□□□ -0.97
CHD3-202ENST00000358181 DDX31Q9H8H2 851 aaKnown RBP9□□□□□ -0.97
CHD3-202ENST00000358181 TMEM9BQ9NQ34 198 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SLC45A1Q9Y2W3 748 aa9□□□□□ -0.97
CHD3-202ENST00000358181 ZNF840PA6NDX5 716 aa9□□□□□ -0.97
CHD3-202ENST00000358181 DEFA6Q01524 100 aa9□□□□□ -0.97
CHD3-202ENST00000358181 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
CHD3-202ENST00000358181 FAM71CQ8NEG0 241 aa9□□□□□ -0.97
CHD3-202ENST00000358181 DEFB124Q8NES8 71 aa9□□□□□ -0.97
CHD3-202ENST00000358181 OR52H1Q8NGJ2 320 aa9□□□□□ -0.97
CHD3-202ENST00000358181 LYSMD1Q96S90 227 aa9□□□□□ -0.97
CHD3-202ENST00000358181 RAB18Q9NP72 206 aa9□□□□□ -0.97
CHD3-202ENST00000358181 EBF1Q9UH73 591 aa9□□□□□ -0.97
CHD3-202ENST00000358181 MEGF11A6BM72 1044 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 ZNF195O14628 629 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 HPNP05981 417 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 APELAP0DMC3 54 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 C21orf58P58505 322 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 KRTDAPP60985 99 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 GLYR1Q49A26 553 aaPredicted RBP8.99□□□□□ -0.97
CHD3-202ENST00000358181 FAM109BQ6ICB4 259 aaPredicted RBP8.99□□□□□ -0.97
CHD3-202ENST00000358181 H3F3CQ6NXT2 135 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 ZNF322Q6U7Q0 402 aaPredicted RBP8.99□□□□□ -0.97
CHD3-202ENST00000358181 LRRTM3Q86VH5 581 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 SIGLECL1Q8N7X8 197 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 APIPQ96GX9 242 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 NECAP2Q9NVZ3 263 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 SCML1Q9UN30 329 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 A0A1W2PP18 115 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 SSSCA1O60232 199 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 SPINK4O60575 86 aa8.99□□□□□ -0.97
CHD3-202ENST00000358181 GLI4P10075 376 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms