RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 RAB11BQ15907 218 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 NKPD1Q17RQ9 610 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 ATPAF1Q5TC12 328 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-205ENST00000357568 RAB12Q6IQ22 244 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 SLC25A42Q86VD7 318 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 C15orf54Q8N8G6 183 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 EXD3Q8N9H8 876 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 TCEAL3Q969E4 200 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 SLC25A28Q96A46 364 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 SAT2Q96F10 170 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-205ENST00000357568 ZNF75AQ96N20 296 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 TTTY10Q9BZA0 68 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 CHST6Q9GZX3 395 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 USP36Q9P275 1121 aaKnown RBP9.66□□□□□ -0.86
CAPN3-205ENST00000357568 POMT1Q9Y6A1 747 aa9.66□□□□□ -0.86
CAPN3-205ENST00000357568 HEATR5BQ9P2D3 2071 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 CRYBA1P05813 215 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 FABP1P07148 127 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 ACAA1P09110 424 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 ZNF735P0CB33 412 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 SMIM10L1P0DMW3 83 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 PTNP21246 168 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 ACAA2P42765 397 aaKnown RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 PJVKQ0ZLH3 352 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 POM121L1PQ3SYA9 428 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 AWAT2Q6E213 333 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 LYG2Q86SG7 212 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 CDC20BQ86Y33 519 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 CBLN2Q8IUK8 224 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 OR5AP2Q8NGF4 316 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 MITD1Q8WV92 249 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 PTX4Q96A99 478 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 SMIM10Q96HG1 83 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 INSM2Q96T92 566 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 SMAD5Q99717 465 aaKnown RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 ALG12Q9BV10 488 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 TSPAN10Q9H1Z9 355 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 C6orf106Q9H6K1 298 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 SEBOXQ9HB31 216 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.86
CAPN3-205ENST00000357568 MRM2Q9UI43 246 aaKnown RBP9.65□□□□□ -0.86
CAPN3-205ENST00000357568 TRAV18A0A075B6X5 111 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 TRAV20A0A0B4J274 112 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 MEX3AA1L020 520 aaKnown RBP9.65□□□□□ -0.87
CAPN3-205ENST00000357568 PRR19A6NJB7 356 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 OR2AT4A6NND4 320 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 F5H0A9 414 aaPredicted RBP9.65□□□□□ -0.87
CAPN3-205ENST00000357568 K7EQS6 105 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 PEX12O00623 359 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 EIF3GO75821 320 aaKnown RBP eCLIP9.65□□□□□ -0.87
CAPN3-205ENST00000357568 NGFRP08138 427 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 ZBTB25P24278 435 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 PPICP45877 212 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 BTN3A2P78410 334 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 CCINQ13939 588 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 ALG10BQ5I7T1 473 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 TMEM88Q6PEY1 159 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 GALNT16Q8N428 558 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 LIPHQ8WWY8 451 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 ZBTB8AQ96BR9 441 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 NRTNQ99748 197 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 PRRT1Q99946 306 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 HDAC8Q9BY41 377 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 LYRM4Q9HD34 91 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 THAP10Q9P2Z0 257 aaPredicted RBP9.65□□□□□ -0.87
CAPN3-205ENST00000357568 TMEM14AQ9Y6G1 99 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 SZT2Q5T011 3432 aa9.65□□□□□ -0.87
CAPN3-205ENST00000357568 NUDT21O43809 227 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 NDUFS6O75380 124 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 NKX2-2O95096 273 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 TXNDC12O95881 172 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 S100PP25815 95 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 TACR3P29371 465 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 RABIFP47224 123 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 SLC6A9P48067 706 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 POU3F4P49335 361 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PRKXP51817 358 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PNLIPRP2P54317 469 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 ENPP2Q13822 863 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 ELAVL3Q14576 367 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 HNRNPA1L2Q32P51 320 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 CDNFQ49AH0 187 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 EMC4Q5J8M3 183 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 MISPQ8IVT2 679 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PPP1R1CQ8WVI7 109 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 CLDN23Q96B33 292 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 FAM3DQ96BQ1 224 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 SEH1LQ96EE3 360 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 OR51M1Q9H341 326 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 SYNPO2LQ9H987 977 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 UQCC1Q9NVA1 299 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 DNAJB12Q9NXW2 375 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 EDARQ9UNE0 448 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 TBC1D3IA0A087WXS9 549 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 EFCAB7A8K855 629 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms