RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 IFNA5P01569 189 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF705AQ6ZN79 300 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CCDC54Q8NEL0 328 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 SFXN5Q8TD22 340 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 HAS2Q92819 552 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 NXF5Q9H1B4 397 aaKnown RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 FN3KRPQ9HA64 309 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ABCA7Q8IZY2 2146 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 LILRB5O75023 590 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 COL9A1P20849 921 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CDK2P24941 298 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 HTR1FP30939 366 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 CRYBB2P43320 205 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ZP2Q05996 745 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ASB6Q9NWX5 421 aa12.87□□□□□ -0.35
SREBF1-202ENST00000355815 ARHGEF17Q96PE2 2063 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-202ENST00000355815 A0A087WV62 115 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 KDM4EB2RXH2 506 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-202ENST00000355815 GPR31O00270 319 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 PHOX2AO14813 284 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 PLA2G10O15496 165 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 CFIP05156 583 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 GIPP09681 153 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF620Q6ZNG0 422 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 Q6ZS52 159 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 PRRT1Q99946 306 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 C19orf43Q9BQ61 176 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 BTBD2Q9BX70 525 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 POFUT1Q9H488 388 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 LMAN1LQ9HAT1 526 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 LRRC37A2A6NM11 1700 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 A0A1W2PPV9 198 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 PRAMEF27A3QJZ7 478 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SYT7O43581 403 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SLC16A7O60669 478 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
SREBF1-202ENST00000355815 STK17BO94768 372 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 IFNGR1P15260 489 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF44P15621 663 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SPI1P17947 270 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SRMP19623 302 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 PLCXD2Q0VAA5 305 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 DMRTC1Q5HYR2 192 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SCN4AP35499 1836 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 OR5H14A6NHG9 310 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SELENOFO60613 162 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 HACD4Q5VWC8 232 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 VN1R4Q7Z5H5 301 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 TRAPPC6BQ86SZ2 158 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SIRT6Q8N6T7 355 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SUCNR1Q9BXA5 334 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 KLRF1Q9NZS2 232 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 SPTA1P02549 2419 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 RALGAPA2Q2PPJ7 1873 aa12.86□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF98A6NK75 572 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 NME2P1O60361 137 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM225Q6GV28 225 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 RPL22L1Q6P5R6 122 aaKnown RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 UNKLQ9H9P5 680 aaKnown RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 PCDHGA9Q9Y5G4 932 aaKnown RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 GPR179Q6PRD1 2367 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 IGHV3-20A0A0C4DH32 117 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 TMEM200CA6NKL6 621 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 WNT1P04628 370 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 FPR3P25089 353 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 NPY4RP50391 375 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ELOCQ15369 112 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 OR2AK2Q8NG84 335 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ZNF442Q9H7R0 627 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 DCTN6O00399 190 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 SPINT1O43278 529 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ITGB2P05107 769 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 HMGA2P52926 109 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 EMP2P54851 167 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
SREBF1-202ENST00000355815 TPBGQ13641 420 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 RAB30Q15771 203 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 ACTBL2Q562R1 376 aa12.85□□□□□ -0.35
SREBF1-202ENST00000355815 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms