RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 SERTAD3Q9UJW9 196 aa11.66□□□□□ -0.54
COL6A3-203ENST00000353578 OSGIN2Q9Y236 505 aa11.66□□□□□ -0.54
COL6A3-203ENST00000353578 SMCHD1A6NHR9 2005 aa11.66□□□□□ -0.54
COL6A3-203ENST00000353578 A0A1B0GTW7 788 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ABCD4O14678 606 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 GSTP1P09211 210 aaKnown RBP11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR5I1Q13606 314 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 PDGFRLQ15198 375 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR52W1Q6IF63 320 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 PRR22Q8IZ63 422 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 RSG1Q9BU20 258 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 DMRT3Q9NQL9 472 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 TSPAN6O43657 245 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 TYRP1P17643 537 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 AHRP35869 848 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 SGCAQ16586 387 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 TXNRD3NBQ6F5E7 133 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 UQCC1Q9NVA1 299 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 GIMAP2Q9UG22 337 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 TMEM269A0A1B0GVZ9 245 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 FAM183AA6NL82 134 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 RAC1P63000 192 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 SHEQ5VZ18 495 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 MFSD4AQ8N468 514 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 KCNK15Q9H427 330 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 CDH20Q9HBT6 801 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ORM1P02763 201 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 FABP2P12104 132 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 NTF3P20783 257 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 LIMK1P53667 647 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 AMIGO3Q86WK7 504 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 NENFQ9UMX5 172 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 DOCK8Q8NF50 2099 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ZNF93P35789 620 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-203ENST00000353578 B2MP61769 119 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ALKBH1Q13686 389 aaKnown RBP11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OR7E24Q6IFN5 339 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 TRNP1Q6NT89 227 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 SERINC2Q96SA4 455 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 CORINQ9Y5Q5 1042 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 PRAMEF27A3QJZ7 478 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 C4orf47A7E2U8 309 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 CLDN7O95471 211 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 GPX2P18283 190 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 MDH2P40926 338 aaKnown RBP11.65□□□□□ -0.54
COL6A3-203ENST00000353578 AMTP48728 403 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 PRAMEF9Q5VWM5 478 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 MKXQ8IYA7 352 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 LHX3Q9UBR4 397 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.54
COL6A3-203ENST00000353578 OMGP23515 440 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 KLRK1P26718 216 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ARRB2P32121 409 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 GPR12P47775 334 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 ASCL1P50553 236 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 HMGB4Q8WW32 186 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 FBRSQ9HAH7 460 aa11.65□□□□□ -0.54
COL6A3-203ENST00000353578 SLC38A8A6NNN8 435 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 TRAPPC2LH3BP13 241 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 CRMP1Q14194 572 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 MISPQ8IVT2 679 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 OR5B3Q8NH48 314 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 JSRP1Q96MG2 331 aaPredicted RBP11.65□□□□□ -0.55
COL6A3-203ENST00000353578 TP53RKQ96S44 253 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 LPAR3Q9UBY5 353 aa11.65□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF443Q9Y2A4 671 aaPredicted RBP11.65□□□□□ -0.55
COL6A3-203ENST00000353578 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 MCRIP1C9JLW8 97 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 CRHP06850 196 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 MEF2AQ02078 507 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 WDR77Q9BQA1 342 aaPredicted RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 IER3IP1Q9Y5U9 82 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 WSB1Q9Y6I7 421 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 C21orf62-AS1Q17RA5 79 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 RGMBQ6NW40 437 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SLC35G3Q8N808 338 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 PTGER4P35408 488 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 EGR3Q06889 387 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 OR52R1Q8NGF1 315 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 MCHR2Q969V1 340 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 PRTFDC1Q9NRG1 225 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SLC23A2Q9UGH3 650 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 OR6C76A6NM76 312 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 PIGAP37287 484 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 OTOP2Q7RTS6 562 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ABI3BPQ7Z7G0 1075 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 RPUSD4Q96CM3 377 aaKnown RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 UQCR10Q9UDW1 63 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 PGA3P0DJD8 388 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SULT1A3P0DMM9 295 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SULT1A4P0DMN0 295 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 NPAS1Q99742 590 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms