RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CST11Q9H112 138 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SEC61A2Q9H9S3 476 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 MRPS33Q9Y291 106 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DTX4Q9Y2E6 619 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TBC1D3KA0A087X1G2 549 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 A0A0A6YYC8 382 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TBC1D3BA6NDS4 549 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TBC1D3FA6NER0 549 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TMEM235A6NFC5 223 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 I3L1I5 382 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 AP4M1O00189 453 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LEFTY2O00292 366 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DCTN6O00399 190 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 PHYHO14832 338 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GPR37O15354 613 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DOK2O60496 412 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ADAMTS4O75173 837 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 HEXAP06865 529 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CTSAP10619 480 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SELLP14151 372 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 GABRA3P34903 492 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 METAP1P53582 386 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TRMT12Q53H54 448 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DCST2Q5T1A1 773 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 TBC1D3GQ6DHY5 549 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 PARS2Q7L3T8 475 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 NRROSQ86YC3 692 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 LRRC25Q8N386 305 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF565Q8N9K5 539 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 OR2L2Q8NH16 312 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 AKR7LQ8NHP1 331 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SLAMF9Q96A28 289 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 FOXN4Q96NZ1 517 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 CASD1Q96PB1 797 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 MFRPQ9BY79 579 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 DPEP2Q9H4A9 486 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 METTL8Q9H825 291 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 MKKSQ9NPJ1 570 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 METTL1Q9UBP6 276 aaKnown RBP6.94□□□□□ -1.3
BRCA1-201ENST00000352993 SLC23A2Q9UGH3 650 aa6.94□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF860A6NHJ4 632 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 C4orf47A7E2U8 309 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 H7C1C5 153 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 GREM1O60565 184 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 AGR2O95994 175 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ERCC1P07992 297 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ADRB3P13945 408 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 LCN6P62502 163 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 SQSTM1Q13501 440 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 KIAA0141Q14154 515 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ABHD17CQ6PCB6 329 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 LYG2Q86SG7 212 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ACBD4Q8NC06 268 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 RNASE11Q8TAA1 199 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 MS4A6EQ96DS6 147 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 DTD2Q96FN9 168 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF514Q96K75 400 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 SMIM3Q9BZL3 60 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ALX4Q9H161 411 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 FRRS1LQ9P0K9 344 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 LPAR3Q9UBY5 353 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 CGGBP1Q9UFW8 167 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 TMED7Q9Y3B3 224 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 C7orf77A4D0Y5 90 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 URADA6NGE7 173 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 NUDT19A8MXV4 375 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 C4orf51C9J302 202 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 EIF1AYO14602 144 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 FGF16O43320 207 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ADH1AP07327 375 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 RAB5AP20339 215 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 EIF1AXP47813 144 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 CAV2P51636 162 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 EEF1A1P68104 462 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 ZNF616Q08AN1 781 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 DUSP8Q13202 625 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 SLC9A3R2Q15599 337 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 TMEM35AQ53FP2 167 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 AWAT1Q58HT5 328 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 EIF5AL1Q6IS14 154 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 SLC39A5Q6ZMH5 540 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 CA5BP1Q8WTZ4 195 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 NUDCD2Q8WVJ2 157 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 IP6K3Q96PC2 410 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 OR52A5Q9H2C5 316 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 PRO1933Q9H354 126 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 SPACA1Q9HBV2 294 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 GFOD1Q9NXC2 390 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 PCYT1BQ9Y5K3 369 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 DMRT1Q9Y5R6 373 aa6.93□□□□□ -1.3
BRCA1-201ENST00000352993 MDC1Q14676 2089 aaKnown RBP6.93□□□□□ -1.3
BRCA1-201ENST00000352993 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
BRCA1-201ENST00000352993 PRR32B1ATL7 298 aa6.92□□□□□ -1.3
BRCA1-201ENST00000352993 IFNA17P01571 189 aa6.92□□□□□ -1.3
BRCA1-201ENST00000352993 CD74P04233 296 aa6.92□□□□□ -1.3
BRCA1-201ENST00000352993 PCCBP05166 539 aa6.92□□□□□ -1.3
BRCA1-201ENST00000352993 ITGA5P08648 1049 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms