RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 RHBDD2Q6NTF9 364 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 ZNF767PQ75MW2 155 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 TMPRSS9Q7Z410 1059 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 APCDD1LQ8NCL9 501 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 C15orf40Q8WUR7 153 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 C8orf44Q96CB5 159 aa19.6■□□□□ 0.73
SHMT1-202ENST00000352886 ATXN7L1Q9ULK2 861 aaPredicted RBP19.6■□□□□ 0.73
SHMT1-202ENST00000352886 ASCC3Q8N3C0 2202 aaKnown RBP19.59■□□□□ 0.73
SHMT1-202ENST00000352886 ARPC1BO15143 372 aaKnown RBP19.59■□□□□ 0.73
SHMT1-202ENST00000352886 GLSO94925 669 aaPredicted RBP19.59■□□□□ 0.73
SHMT1-202ENST00000352886 WNT11O96014 354 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 OR51D1Q8NGF3 324 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 TMEM234Q8WY98 164 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 NXPE2Q96DL1 559 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 TGIF2Q9GZN2 237 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 SRPK3Q9UPE1 567 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 KIF26BQ2KJY2 2108 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 FTCDNL1E5RQL4 147 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 SCAND1P57086 179 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 ZP1P60852 638 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 ROM1Q03395 351 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 EIF2B1Q14232 305 aaKnown RBP19.59■□□□□ 0.73
SHMT1-202ENST00000352886 OLFML2AQ68BL7 652 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 KCTD18Q6PI47 426 aaPredicted RBP19.59■□□□□ 0.73
SHMT1-202ENST00000352886 MAMSTRQ6ZN01 415 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 MDGA2Q7Z553 956 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 CDH24Q86UP0 819 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 SLC38A9Q8NBW4 561 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 ABHD6Q9BV23 337 aa19.59■□□□□ 0.73
SHMT1-202ENST00000352886 A0A1B0GVI7 797 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 MPZL1O95297 269 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 ITGA5P08648 1049 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 FBXO45P0C2W1 286 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 GLO1Q04760 184 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 MFGE8Q08431 387 aaPredicted RBP19.58■□□□□ 0.72
SHMT1-202ENST00000352886 ZNF782Q6ZMW2 699 aaPredicted RBP19.58■□□□□ 0.72
SHMT1-202ENST00000352886 MISPQ8IVT2 679 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
SHMT1-202ENST00000352886 THRSPQ92748 146 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 HGDQ93099 445 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 GPR137Q96N19 417 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 PTTG3PQ9NZH4 202 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 EMC3Q9P0I2 261 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 SUSD2Q9UGT4 822 aa19.58■□□□□ 0.72
SHMT1-202ENST00000352886 COA3Q9Y2R0 106 aaPredicted RBP19.58■□□□□ 0.72
SHMT1-202ENST00000352886 XRCC3O43542 346 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 PRAF2O60831 178 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 TGM6O95932 706 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 EFNB2P52799 333 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 LINC00303Q3SY05 128 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 C5orf46Q6UWT4 87 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 ANKRD37Q7Z713 158 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 PMEPA1Q969W9 287 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 ARL5BQ96KC2 179 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 ARPC5LQ9BPX5 153 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 SEMA4CQ9C0C4 833 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 NOX3Q9HBY0 568 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 DLL4Q9NR61 685 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 CRABP1P29762 137 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 RIDAP52758 137 aaKnown RBP19.57■□□□□ 0.72
SHMT1-202ENST00000352886 GNG2P59768 71 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 PUDPQ08623 228 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 CAMK2DQ13557 499 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 Q6ZTK2 550 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 NDUFAF7Q7L592 441 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 ZNF248Q8NDW4 579 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 SHDQ96IW2 340 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 LRP12Q9Y561 859 aa19.57■□□□□ 0.72
SHMT1-202ENST00000352886 A0A1B0GUH1 482 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 NAT1P18440 290 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 SHBQ15464 509 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 WDR45BQ5MNZ6 344 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 ASPHD2Q6ICH7 369 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 SLC25A25Q6KCM7 469 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 LYPD8Q6UX82 237 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 ZNF574Q6ZN55 896 aaPredicted RBP19.56■□□□□ 0.72
SHMT1-202ENST00000352886 VDAC3Q9Y277 283 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 ANKUB1A6NFN9 424 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 TIAF1O95411 115 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 HEXBP07686 556 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 POU3F4P49335 361 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 C17orf67Q0P5P2 114 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 OR7A5Q15622 319 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 METTL11BQ5VVY1 283 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 TMEM71Q6P5X7 295 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 ANKRD16Q6P6B7 361 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 DNM1P46Q6ZS02 220 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 NFAM1Q8NET5 270 aaPredicted RBP19.56■□□□□ 0.72
SHMT1-202ENST00000352886 OR8H1Q8NGG4 311 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 ZNF436Q9C0F3 470 aaPredicted RBP19.56■□□□□ 0.72
SHMT1-202ENST00000352886 DUSP15Q9H1R2 295 aaPredicted RBP19.56■□□□□ 0.72
SHMT1-202ENST00000352886 KCNK15Q9H427 330 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 CDV3Q9UKY7 258 aaKnown RBP19.56■□□□□ 0.72
SHMT1-202ENST00000352886 DHDHQ9UQ10 334 aa19.56■□□□□ 0.72
SHMT1-202ENST00000352886 MS4A18H0YCH9 400 aa19.55■□□□□ 0.72
SHMT1-202ENST00000352886 CTAG2O75638 210 aa19.55■□□□□ 0.72
SHMT1-202ENST00000352886 ALDOBP05062 364 aa19.55■□□□□ 0.72
SHMT1-202ENST00000352886 CFPP27918 469 aa19.55■□□□□ 0.72
SHMT1-202ENST00000352886 SELENOPP49908 381 aa19.55■□□□□ 0.72
SHMT1-202ENST00000352886 MS4A18Q3C1V0 323 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms