RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ISG20L2Q9H9L3 353 aaKnown RBP7.34□□□□□ -1.23
CD44-205ENST00000352818 SNTG1Q9NSN8 517 aa7.34□□□□□ -1.23
CD44-205ENST00000352818 GALNT8Q9NY28 637 aa7.34□□□□□ -1.23
CD44-205ENST00000352818 GPN3Q9UHW5 284 aaPredicted RBP7.34□□□□□ -1.23
CD44-205ENST00000352818 ZNF281Q9Y2X9 895 aa7.34□□□□□ -1.23
CD44-205ENST00000352818 YARS2Q9Y2Z4 477 aaKnown RBP7.34□□□□□ -1.23
CD44-205ENST00000352818 TMED7Q9Y3B3 224 aa7.34□□□□□ -1.23
CD44-205ENST00000352818 ADAM18Q9Y3Q7 739 aa7.34□□□□□ -1.23
CD44-205ENST00000352818 MPDZO75970 2070 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 IGHV3-20A0A0C4DH32 117 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TMEM72A0PK05 275 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 OR6C68A6NDL8 312 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ANKRD61A6NGH8 418 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 NPIPB13A6NJU9 1138 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 C9J4A7 227 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 NPIPB4C9JG80 1138 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ZNF208O43345 1280 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 SCO2O43819 266 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 OR2T1O43869 369 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 SUSD5O60279 629 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 CRYABP02511 175 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 CD63P08962 238 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 MRPL3P09001 348 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 CLUP10909 449 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 SDC2P34741 201 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 APOBEC1P41238 236 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 FOLR3P41439 243 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TGM4P49221 684 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 CENPAP49450 140 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 SLC16A1P53985 500 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 CTXN1P60606 82 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ERVK-25P63136 954 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 HSF1Q00613 529 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 MRPL28Q13084 256 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 HNRNPA0Q13151 305 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 TOMM34Q15785 309 aaPredicted RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 EXT1Q16394 746 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 NTRK2Q16620 822 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TRIM16LQ309B1 348 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 MESTQ5EB52 335 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 Q5PR19 223 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 LINC01590Q5TEZ4 76 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 C1orf140Q5VVS0 124 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 LEG1Q6P5S2 330 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TMEM91Q6ZNR0 172 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TRILQ7L0X0 811 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 PXKQ7Z7A4 578 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TPRA1Q86W33 373 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ADGRG3Q86Y34 549 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 LYSMD2Q8IV50 215 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 DND1Q8IYX4 353 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 MS4A15Q8N5U1 240 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 C10orf53Q8N6V4 93 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ZFP41Q8N8Y5 198 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 SCAIQ8N9R8 606 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 OR5J2Q8NH18 312 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ELP5Q8TE02 316 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TMEM203Q969S6 136 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 C4orf36Q96KX1 117 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 PGLYRP3Q96LB9 341 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 CEP19Q96LK0 163 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 Q96M85 177 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 Q96MF0 132 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TSPAN32Q96QS1 320 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 NMNAT3Q96T66 252 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ALG12Q9BV10 488 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 C19orf24Q9BVV8 132 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ZNF700Q9H0M5 742 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 TSPAN10Q9H1Z9 355 aaPredicted RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 PLEKHF2Q9H8W4 249 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 KLHL1Q9NR64 748 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 INIPQ9NRY2 104 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 MRPL39Q9NYK5 338 aaKnown RBP7.33□□□□□ -1.24
CD44-205ENST00000352818 MYOTQ9UBF9 498 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 DAPK2Q9UIK4 370 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 CMAHPQ9Y471 501 aa7.33□□□□□ -1.24
CD44-205ENST00000352818 ARPC4-TTLL3A0A0A6YYG9 625 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 A0A0G2JK05 382 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 ANKRD33BA6NCL7 494 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 FTCDNL1E5RQL4 147 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 BLOC1S5-TXNDC5H3BN57 136 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 CTDSP2O14595 271 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PHYHO14832 338 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 GPRIN2O60269 458 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 TMEM127O75204 238 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 TRIM3O75382 744 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 AHSA1O95433 338 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 NUDT14O95848 222 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PTTG1O95997 202 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 RENP00797 406 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 SERPINA3P01011 423 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 GYPBP06028 91 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PRKCAP17252 672 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PTBP1P26599 531 aaKnown RBP eCLIP7.32□□□□□ -1.243e-6■■■■■ 30.2
CD44-205ENST00000352818 TNFSF8P32971 234 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 PTGDSP41222 190 aa7.32□□□□□ -1.24
CD44-205ENST00000352818 CDKN2AP42771 156 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 RPS5P46782 204 aaKnown RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 GBX2P52951 348 aaPredicted RBP7.32□□□□□ -1.24
CD44-205ENST00000352818 BLVRAP53004 296 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms