RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RAB33BQ9H082 229 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 CST11Q9H112 138 aa13.79□□□□□ -0.2
PTBP1-201ENST00000349038 A0A1W2PQ45 241 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-201ENST00000349038 A0A1W2PQY0 241 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 C5orf52A6NGY3 159 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 MSGN1A6NI15 193 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF736B4DX44 427 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 LDB3O75112 727 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 CSF1P09603 554 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 JMJD7P0C870 316 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 EXOSC7Q15024 291 aaKnown RBP13.78□□□□□ -0.2
PTBP1-201ENST00000349038 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 OR5T3Q8NGG3 340 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 OR6N1Q8NGY5 312 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ATG101Q9BSB4 218 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 TOLLIPQ9H0E2 274 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 SCGB1D2O95969 90 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 CPMP14384 443 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 GJA4P35212 333 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 SERPINF1P36955 418 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 AWAT1Q58HT5 328 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ATPAF1Q5TC12 328 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-201ENST00000349038 LEG1Q6P5S2 330 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 NRSN1Q8IZ57 195 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 COX18Q8N8Q8 333 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF565Q8N9K5 539 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 OR7G2Q8NG99 324 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 POTEKPQ9BYX7 375 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 SPACA1Q9HBV2 294 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 ZNF223Q9UK11 482 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-201ENST00000349038 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
PTBP1-201ENST00000349038 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 C4orf51C9J302 202 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 INHAP05111 366 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 PRF1P14222 555 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 FOSL2P15408 326 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 EIF2S3P41091 472 aaKnown RBP13.77□□□□□ -0.2
PTBP1-201ENST00000349038 ECH1Q13011 328 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 C2orf76Q3KRA6 126 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 CCDC54Q8NEL0 328 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 SMOC1Q9H4F8 434 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 METTL8Q9H825 291 aaKnown RBP13.77□□□□□ -0.2
PTBP1-201ENST00000349038 CCL26Q9Y258 94 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 MRPS33Q9Y291 106 aaKnown RBP13.77□□□□□ -0.2
PTBP1-201ENST00000349038 FBXO7Q9Y3I1 522 aa13.77□□□□□ -0.2
PTBP1-201ENST00000349038 CTDSPLO15194 276 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 EMC8O43402 210 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 OR2F2O95006 317 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 RAB40ALP0C0E4 278 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 NDUFS1P28331 727 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 LBX1P52954 281 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ACTC1P68032 377 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ACTA1P68133 377 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 SPOCK1Q08629 439 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 OR2F1Q13607 317 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 DPY19L4Q7Z388 723 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 AVL9Q8NBF6 648 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 RAB40AQ8WXH6 277 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 THOC3Q96J01 351 aaKnown RBP13.77□□□□□ -0.21
PTBP1-201ENST00000349038 LURAP1Q96LR2 239 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ARHGDIGQ99819 225 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 MSRAQ9UJ68 235 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 KCNK6Q9Y257 313 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 PLGP00747 810 aaPredicted RBP13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ERCC1P07992 297 aaPredicted RBP13.77□□□□□ -0.21
PTBP1-201ENST00000349038 HOXB5P09067 269 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 OR8U8P0C7N1 319 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 GLI4P10075 376 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 RNF212Q495C1 297 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 DHRS11Q6UWP2 260 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
PTBP1-201ENST00000349038 PELI2Q9HAT8 420 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 TMEM27Q9HBJ8 222 aa13.77□□□□□ -0.21
PTBP1-201ENST00000349038 KLF4O43474 513 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 CTAG2O75638 210 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 ADH1AP07327 375 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 QDPRP09417 244 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 LAP3P28838 519 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
PTBP1-201ENST00000349038 MICBQ29980 383 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 DEFB134Q4QY38 66 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 FAM180AQ6UWF9 173 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 ZNF547Q8IVP9 402 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 ADAD2Q8NCV1 583 aaKnown RBP13.76□□□□□ -0.21
PTBP1-201ENST00000349038 NUDCD2Q8WVJ2 157 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 MRGPRX3Q96LB0 322 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 PRSS27Q9BQR3 290 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 UPB1Q9UBR1 384 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 SLC22A13Q9Y226 551 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 IFNA2P01563 188 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 PRH1P02810 166 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 IFNA6P05013 189 aa13.76□□□□□ -0.21
PTBP1-201ENST00000349038 ACTA2P62736 377 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms