RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TMEM239Q8WW34 195 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF300Q96RE9 604 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 NUDT22Q9BRQ3 303 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 BTNL2Q9UIR0 455 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 TCRBV16S1A1N1A0A5B0 115 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 MPTX1A8MV57 137 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 POU3F2P20265 443 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 GPX3P22352 226 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 THBS2P35442 1172 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 KRTDAPP60985 99 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 RCBTB1Q8NDN9 531 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF775Q96BV0 537 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 PRSS16Q9NQE7 514 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 EMCNQ9ULC0 261 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 SIT1Q9Y3P8 196 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 A6NIN4 97 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 H3BNC9 293 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 MGST1P10620 155 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 C1orf185Q5T7R7 199 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 TMPRSS11FQ6ZWK6 438 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 OR5W2Q8NH69 310 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 GORASP2Q9H8Y8 452 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 UCK1Q9HA47 277 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF160Q9HCG1 818 aa10.23□□□□□ -0.77
SMARCE1-202ENST00000348513 TAAR5O14804 337 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 DTYMKP23919 212 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 CITED1Q99966 193 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 GGACTQ9BVM4 153 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 SLC25A18Q9H1K4 315 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 CER1O95813 267 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 EGFP01133 1207 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 F3P13726 295 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 PBX2P40425 430 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 MBTPS1Q14703 1052 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 MANEAQ5SRI9 462 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 OR1J2Q8NGS2 313 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 ARHGDIGQ99819 225 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 MEIKINA0A087WXM9 373 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 FXYD4P59646 89 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 PRAMEF20Q5VT98 475 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 Q6ZTK2 550 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 OR51T1Q8NGJ9 327 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 FNDC9Q8TBE3 224 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 SGCZQ96LD1 299 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF75AQ96N20 296 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 KIF13AQ9H1H9 1805 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 TRAV18A0A075B6X5 111 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 J3KTA2 159 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 OR8U8P0C7N1 319 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 POLR2IP36954 125 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 GSK3AP49840 483 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 BPIFB3P59826 476 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 RPS25P62851 125 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 OR8U1Q8NH10 309 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 ASB11Q8WXH4 323 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 THOC3Q96J01 351 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 SYT11Q9BT88 431 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 DHRS4Q9BTZ2 278 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 DUSP23Q9BVJ7 150 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 CUTCQ9NTM9 273 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 MYOTQ9UBF9 498 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 CAMK2AQ9UQM7 478 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 STRAPQ9Y3F4 350 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 ZNF736B4DX44 427 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 H0YGG7 62 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 NUDT21O43809 227 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 GPRIN2O60269 458 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 HLA-HP01893 362 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 APEHP13798 732 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 APLNRP35414 380 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 AHRP35869 848 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 F2RL1P55085 397 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 NKPD1Q17RQ9 610 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 ACOT6Q3I5F7 207 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 CBLCQ9ULV8 474 aa10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 UBE2J1Q9Y385 318 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-202ENST00000348513 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 A0A1B0GUH1 482 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 MDFIC2A0A1B0GVS7 189 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SLC22A20A6NK97 555 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 G3V3Y1 287 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 HIST1H1TP22492 207 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 PRPS1P60891 318 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 RAB11AP62491 216 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 RAB40BQ12829 278 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SLC14A2Q15849 920 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SYPL1Q16563 259 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SEZ6L2Q6UXD5 910 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 RBMS3Q6XE24 437 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 OR9K2Q8NGE7 335 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 NANOS1Q8WY41 292 aaKnown RBP10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SLC25A31Q9H0C2 315 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 SHARPINQ9H0F6 387 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 NSG1A0A0A6YYJ2 146 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 MEIS3P1A6NDR6 274 aa10.21□□□□□ -0.77
SMARCE1-202ENST00000348513 A6NIZ1 184 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms