RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 AKAP1Q92667 903 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC4-202ENST00000345795 PGAM5Q96HS1 289 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ALKBH3Q96Q83 286 aaPredicted RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 PTDSS2Q9BVG9 487 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 B3GALT1Q9Y5Z6 326 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 BOD1L1Q8NFC6 3051 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 TRAV8-7A0A075B6U6 113 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 LILRA5A6NI73 299 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 A8MVM7 634 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 DPM1O60762 260 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 SLC19A2O60779 497 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 RFX2P48378 723 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 POU4F2Q12837 409 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 TMEM201Q5SNT2 666 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 AWAT2Q6E213 333 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 LRRC28Q86X40 367 aaPredicted RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ZNF615Q8N8J6 731 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ROBO4Q8WZ75 1007 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 UPRTQ96BW1 309 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 SMIM19Q96E16 107 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 CHMP1AQ9HD42 196 aaPredicted RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 NRIP3Q9NQ35 241 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 SLC22A11Q9NSA0 550 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 RBFOX1Q9NWB1 397 aaKnown RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 NOP16Q9Y3C1 178 aaKnown RBP12.01□□□□□ -0.49
CASC4-202ENST00000345795 PMS2P1A4D2B8 440 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 TMEM235A6NFC5 223 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ZNF878C9JN71 531 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 RER1O15258 196 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 LMX1BO60663 402 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 YES1P07947 543 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 GDF1P27539 372 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 P2RX1P51575 399 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ARIH2OSQ8N7S6 290 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 SLC22A8Q8TCC7 542 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 PIGTQ969N2 578 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 GSKIPQ9P0R6 139 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 ASPMQ8IZT6 3477 aa12.01□□□□□ -0.49
CASC4-202ENST00000345795 FAM230AA0A1W2PPH8 454 aa12□□□□□ -0.49
CASC4-202ENST00000345795 A0A1W2PR77 199 aa12□□□□□ -0.49
CASC4-202ENST00000345795 TP53I11O14683 189 aa12□□□□□ -0.49
CASC4-202ENST00000345795 RAB14P61106 215 aa12□□□□□ -0.49
CASC4-202ENST00000345795 SF3A2Q15428 464 aaKnown RBP12□□□□□ -0.49
CASC4-202ENST00000345795 CPEB2Q7Z5Q1 589 aaKnown RBP12□□□□□ -0.49
CASC4-202ENST00000345795 PLCZ1Q86YW0 608 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ASCC1Q8N9N2 400 aaKnown RBP12□□□□□ -0.49
CASC4-202ENST00000345795 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
CASC4-202ENST00000345795 OR51E1Q8TCB6 317 aa12□□□□□ -0.49
CASC4-202ENST00000345795 SLC41A2Q96JW4 573 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ABHD6Q9BV23 337 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ST6GALNAC5Q9BVH7 336 aa12□□□□□ -0.49
CASC4-202ENST00000345795 LDAHQ9H6V9 325 aa12□□□□□ -0.49
CASC4-202ENST00000345795 PARPBPQ9NWS1 579 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ZNF223Q9UK11 482 aaPredicted RBP12□□□□□ -0.49
CASC4-202ENST00000345795 CHD8Q9HCK8 2581 aa12□□□□□ -0.49
CASC4-202ENST00000345795 A0A096LPE4 126 aa12□□□□□ -0.49
CASC4-202ENST00000345795 A0A1W2PPZ6 126 aa12□□□□□ -0.49
CASC4-202ENST00000345795 FAM221AA4D161 298 aa12□□□□□ -0.49
CASC4-202ENST00000345795 PLA2G10O15496 165 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ARPC5O15511 151 aa12□□□□□ -0.49
CASC4-202ENST00000345795 EPXP11678 715 aa12□□□□□ -0.49
CASC4-202ENST00000345795 CFAP77Q6ZQR2 320 aa12□□□□□ -0.49
CASC4-202ENST00000345795 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
CASC4-202ENST00000345795 DDIT4LQ96D03 193 aa12□□□□□ -0.49
CASC4-202ENST00000345795 BAIAP2Q9UQB8 552 aa12□□□□□ -0.49
CASC4-202ENST00000345795 CACNA1BQ00975 2339 aa12□□□□□ -0.49
CASC4-202ENST00000345795 C5orf51A6NDU8 294 aa12□□□□□ -0.49
CASC4-202ENST00000345795 DDAH2O95865 285 aa12□□□□□ -0.49
CASC4-202ENST00000345795 DNASE1P24855 282 aa12□□□□□ -0.49
CASC4-202ENST00000345795 FOLR3P41439 243 aa12□□□□□ -0.49
CASC4-202ENST00000345795 PSMA6P60900 246 aaKnown RBP12□□□□□ -0.49
CASC4-202ENST00000345795 RPL27P61353 136 aaKnown RBP12□□□□□ -0.49
CASC4-202ENST00000345795 C17orf67Q0P5P2 114 aa12□□□□□ -0.49
CASC4-202ENST00000345795 MYBPHQ13203 477 aa12□□□□□ -0.49
CASC4-202ENST00000345795 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12□□□□□ -0.493e-6■■■■■ 26.9
CASC4-202ENST00000345795 BRICD5Q6PL45 260 aa12□□□□□ -0.49
CASC4-202ENST00000345795 TMEM205Q6UW68 189 aa12□□□□□ -0.49
CASC4-202ENST00000345795 MINDY2Q8NBR6 621 aa12□□□□□ -0.49
CASC4-202ENST00000345795 OR2G2Q8NGZ5 317 aa12□□□□□ -0.49
CASC4-202ENST00000345795 MIB2Q96AX9 1013 aa12□□□□□ -0.49
CASC4-202ENST00000345795 CTHRC1Q96CG8 243 aa12□□□□□ -0.49
CASC4-202ENST00000345795 LANCL2Q9NS86 450 aa12□□□□□ -0.49
CASC4-202ENST00000345795 EEF1E1-BLOC1S5C9J1V9 151 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 CCSO14618 274 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 TLX3O43711 291 aaPredicted RBP11.99□□□□□ -0.49
CASC4-202ENST00000345795 P04436 131 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 ALDOBP05062 364 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 ABOP16442 354 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 EPHA8P29322 1005 aaPredicted RBP11.99□□□□□ -0.49
CASC4-202ENST00000345795 HSF1Q00613 529 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 PLAURQ03405 335 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 SKP2Q13309 424 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 RAB11BQ15907 218 aa11.99□□□□□ -0.49
CASC4-202ENST00000345795 SLC36A2Q495M3 483 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms