RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ZNF44P15621 663 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 NME2P22392 152 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 LSSP48449 732 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TAS2R19P59542 299 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 OR2B8PP59922 312 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 RUNX2Q13950 521 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ADAD2Q8NCV1 583 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CMBLQ96DG6 245 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CMKLR1Q99788 373 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 RHOFQ9HBH0 211 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ENTPD2Q9Y5L3 495 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 RNGTTO60942 597 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 SERPINA5P05154 406 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 SNRNP70P08621 437 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CT62P0C5K7 136 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CD1CP29017 333 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 ADAM8P78325 824 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 CDK3Q00526 305 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 USP53Q70EK8 1073 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 PRSS41Q7RTY9 318 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 JAZF1Q86VZ6 243 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 OR5T3Q8NGG3 340 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 OR13C8Q8NGS7 320 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 PHYHIPQ92561 330 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 FOXRED1Q96CU9 486 aaPredicted RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 AMELYQ99218 206 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
CLCN1-201ENST00000343257 MBNL1Q9NR56 388 aaKnown RBP13.48□□□□□ -0.25
CLCN1-201ENST00000343257 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 A6NLC8 198 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 SRPX2O60687 465 aaPredicted RBP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 TACSTD2P09758 323 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 CLINT1Q14677 625 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 NCMAPQ5T1S8 102 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF585AQ6P3V2 769 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF813Q6ZN06 617 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 BAP18Q8IXM2 172 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 OR4K17Q8NGC6 315 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 OR2G2Q8NGZ5 317 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 PIK3IP1Q96FE7 263 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 COMMD4Q9H0A8 199 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 C9JQL5 133 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 CDC40O60508 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 TPT1P13693 172 aaKnown RBP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 MISPQ8IVT2 679 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 RNF141Q8WVD5 230 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 RRNAD1Q96FB5 475 aaKnown RBP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 AKR1E2Q96JD6 320 aa13.47□□□□□ -0.25
CLCN1-201ENST00000343257 MKKSQ9NPJ1 570 aaPredicted RBP13.47□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1B0GTI1 187 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 hCG_1809904A0A1W2PP81 198 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1W2PR64 198 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 A0A1W2PRV1 198 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 MSGN1A6NI15 193 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PRRT4C9JH25 899 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 SOX1O00570 391 aaPredicted RBP13.46□□□□□ -0.25
CLCN1-201ENST00000343257 GLCEO94923 617 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 AGR2O95994 175 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PLGP00747 810 aaPredicted RBP13.46□□□□□ -0.25
CLCN1-201ENST00000343257 HLA-DQA2P01906 255 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 HSD17B2P37059 387 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 WASP42768 502 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 CHST4Q8NCG5 386 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 TMEM52Q8NDY8 209 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 GPX8Q8TED1 209 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PHYHIPLQ96FC7 376 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 CARHSP1Q9Y2V2 147 aaKnown RBP13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PCDHGA1Q9Y5H4 931 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PRNPP04156 253 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 SMIM6P0DI80 62 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 SERPINF1P36955 418 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 CCR4P51679 360 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 ECH1Q13011 328 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF345Q14585 488 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 GLYATL3Q5SZD4 288 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 POMZP3Q6PJE2 187 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 PRSS35Q8N3Z0 413 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 JAGN1Q8N5M9 183 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 GPR148Q8TDV2 347 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 ZNF558Q96NG5 402 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 KXD1Q9BQD3 176 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.25
CLCN1-201ENST00000343257 C1orf198Q9H425 327 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 CHMP1AQ9HD42 196 aaPredicted RBP13.46□□□□□ -0.25
CLCN1-201ENST00000343257 EPHA6Q9UF33 1036 aa13.46□□□□□ -0.25
CLCN1-201ENST00000343257 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 FGF17O60258 216 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 FBXO24O75426 580 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 SLC25A4P12235 298 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 ACTBP60709 375 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 ACTG1P63261 375 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 IRF4Q15306 451 aa13.46□□□□□ -0.26
CLCN1-201ENST00000343257 KLHL26Q53HC5 615 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms