RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 CMSS1Q9BQ75 279 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 PROCRQ9UNN8 238 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 P2RY10O00398 339 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 HOXB3P14651 431 aaPredicted RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 CX3CR1P49238 355 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 FAPQ12884 760 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 ACKR1Q16570 336 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 MEX3BQ6ZN04 569 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 OR56B4Q8NH76 319 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF486Q96H40 463 aaPredicted RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 SIAEQ9HAT2 523 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 HINT3Q9NQE9 182 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 LANCL2Q9NS86 450 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 PLCXD1Q9NUJ7 323 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 EHFQ9NZC4 300 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 PMS2P1A4D2B8 440 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 APOC3P02656 99 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 GDNFP39905 211 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 FCRL6Q6DN72 434 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 OR5D18Q8NGL1 313 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 A3GALT2U3KPV4 340 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 COL11A1P12107 1806 aaPredicted RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNFX1Q9P2E3 1918 aaKnown RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 MPPED1O15442 326 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 SGCEO43556 437 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 IGFBP1P08833 259 aaPredicted RBP13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 QDPRP09417 244 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 VEGFCP49767 419 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 AMER3Q8N944 861 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 BEST4Q8NFU0 473 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 KCNG3Q8TAE7 436 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 RGCCQ9H4X1 137 aa13.73□□□□□ -0.21
PCDHB13-201ENST00000341948 A0A1B0GVG6 124 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 CLEC2LP0C7M8 214 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 SLC2A1P11166 492 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 TEKQ02763 1124 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 LILRB2Q8N423 598 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 H7C2Y5 167 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 PRAMEF4O60810 478 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 CCL4P13236 92 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 EPHA1P21709 976 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 TAS2R46P59540 309 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 VN1R4Q7Z5H5 301 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 VASH2Q86V25 355 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF225Q9UK10 706 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 NEU3Q9UQ49 428 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 MRPS28Q9Y2Q9 187 aaKnown RBP13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 TOX3O15405 576 aaPredicted RBP13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 CRYABP02511 175 aaKnown RBP13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ATP1B1P05026 303 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 IL2RGP31785 369 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 EMDP50402 254 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 TNK1Q13470 666 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 LYPD4Q6UWN0 246 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 GFRALQ6UXV0 394 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 SPDEFO95238 335 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 EDN3P14138 238 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ERVK-16P61578 105 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 SSPNQ14714 243 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 STEAP3Q658P3 488 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 PMS2CLQ68D20 193 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 LCN10Q6JVE6 187 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 SLC22A24Q8N4F4 322 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 SLA2Q9H6Q3 261 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF286AQ9HBT8 521 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 MED16Q9Y2X0 877 aa13.72□□□□□ -0.21
PCDHB13-201ENST00000341948 HLA-AP01891 365 aaKnown RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 BHLHE23Q8NDY6 225 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 RAB3CQ96E17 227 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 FKRPQ9H9S5 495 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 OCIAD1Q9NX40 245 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 B3GNT2Q9NY97 397 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 CNOT1A5YKK6 2376 aaKnown RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 EP300Q09472 2414 aaPredicted RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 DPM1O60762 260 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 IDH3GP51553 393 aaPredicted RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 RBMS2Q15434 407 aaKnown RBP13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
PCDHB13-201ENST00000341948 ZNF385DQ9H6B1 395 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms