RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 IL20Q9NYY1 176 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CADP27708 2225 aa13.43□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF503-AS2A6NEH8 195 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RENP00797 406 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CECR9P0C854 216 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ANXA8P13928 327 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FASP25445 335 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PTDSS1P48651 473 aaKnown RBP13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CDH11P55287 796 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ACTR3P61158 418 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RAB1AP62820 205 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PIGFQ07326 219 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NPRL3Q12980 569 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ATP6AP1Q15904 470 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF672Q499Z4 452 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CLEC12AQ5QGZ9 265 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TMEM53Q6P2H8 277 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DNM1P34Q6PK57 102 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CD300LDQ6UXZ3 194 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 YTHDF3Q7Z739 585 aaKnown RBP13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TMEM179BQ7Z7N9 219 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 C10orf67Q8IYJ2 551 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IL17RDQ8NFM7 739 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SH3GL3Q99963 347 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 BDH2Q9BUT1 245 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SYT4Q9H2B2 425 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RNF121Q9H920 327 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SEC61A2Q9H9S3 476 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 VSX1Q9NZR4 365 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 BAIAP2Q9UQB8 552 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 UGT2A1Q9Y4X1 527 aa13.42□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF469Q96JG9 3925 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 IGKV1D-43A0A0B4J1Z2 117 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 A0A1W2PPL8 197 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KHDRBS3O75525 346 aaKnown RBP13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CD53P19397 219 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CDAP32320 146 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 GIPRP48546 466 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NAAAQ02083 359 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SPOCK1Q08629 439 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SGCAQ16586 387 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SHQ1Q6PI26 577 aaKnown RBP13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FOXL2NBQ6ZUU3 175 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ATG16L2Q8NAA4 619 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 LILRB1Q8NHL6 650 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TEX47Q8TBZ9 253 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NEUROG1Q92886 237 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PIGTQ969N2 578 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CCL19Q99731 98 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NIPSNAP1Q9BPW8 284 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 RERGLQ9H628 205 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NTN4Q9HB63 628 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FAIMQ9NVQ4 179 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CISD1Q9NZ45 108 aaKnown RBP13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 VPS13CQ709C8 3753 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ROS1P08922 2347 aa13.41□□□□□ -0.26
TNFRSF12A-202ENST00000341627 ATP6V1G2-DDX39BF2Z307 99 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SLC16A7O60669 478 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 SOX14O95416 240 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CTLA4P16410 223 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 MSR1P21757 451 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CRABP1P29762 137 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CDKN2AP42771 156 aaKnown RBP13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KPNB1Q14974 876 aaKnown RBP13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DEFB113Q30KQ7 82 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 FAM27BQ5VT28 67 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 LEG1Q6P5S2 330 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PTCHD4Q6ZW05 846 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 LRRC18Q8N456 261 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 OR2T33Q8NG76 320 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 OR5K1Q8NHB7 308 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 DNAJC9Q8WXX5 260 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 HTRA1Q92743 480 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NABP1Q96AH0 204 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NMNAT3Q96T66 252 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 PLA2G12AQ9BZM1 189 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NUAK2Q9H093 628 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 NOX3Q9HBY0 568 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 CCNB1IP1Q9NPC3 277 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 KIF17Q9P2E2 1029 aa13.4□□□□□ -0.26
TNFRSF12A-202ENST00000341627 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 H3BN98 237 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 BHLHE40O14503 412 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 TMCC2O75069 709 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 PTHP01270 115 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 CELA3BP08861 270 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 CST2P09228 141 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 PATE4P0C8F1 98 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 PRKACGP22612 351 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 PCBD1P61457 104 aa13.39□□□□□ -0.27
TNFRSF12A-202ENST00000341627 PLP2Q04941 152 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms