RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CCDC187A0A096LP49 1063 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 XKRYO14609 159 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 AKR7A2O43488 359 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 TMEM127O75204 238 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 MT-ATP6P00846 226 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 STOMP27105 288 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 FOLR3P41439 243 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 KIR3DL2P43630 455 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 SLC26A5P58743 744 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 RPL27P61353 136 aaKnown RBP13.5□□□□□ -0.25
TPM3-208ENST00000341485 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
TPM3-208ENST00000341485 BTBD16Q32M84 506 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 FAM69AQ5T7M9 428 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 SLC22A10Q63ZE4 541 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 C6orf15Q6UXA7 325 aaPredicted RBP13.5□□□□□ -0.25
TPM3-208ENST00000341485 BTN2A1Q7KYR7 527 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 OR11H7Q8NGC8 314 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 OTOSQ8NHW6 89 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 SYNPRQ8TBG9 265 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
TPM3-208ENST00000341485 RELTQ969Z4 430 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 GON7Q9BXV9 100 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 SLITRK2Q9H156 845 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 OR51J1Q9H342 316 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 PPIEQ9UNP9 301 aaKnown RBP13.5□□□□□ -0.25
TPM3-208ENST00000341485 B9D1Q9UPM9 204 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 TMEM14AQ9Y6G1 99 aa13.5□□□□□ -0.25
TPM3-208ENST00000341485 DMDP11532 3685 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 TRAV8-7A0A075B6U6 113 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 PRSS37A4D1T9 235 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 ZNF254O75437 659 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 DXOO77932 396 aaKnown RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 CD63P08962 238 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 CALCBP10092 127 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 PTH2RP49190 550 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 RPS15P62841 145 aaKnown RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 C6orf183Q5T699 404 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 HES3Q5TGS1 186 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 C1orf140Q5VVS0 124 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 ZNF676Q8N7Q3 588 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 DNAAF1Q8NEP3 725 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 OR51A4Q8NGJ6 313 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 OR2M2Q96R28 347 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 OR11A1Q9GZK7 315 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 TAS2R10Q9NYW0 307 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 PADI1Q9ULC6 663 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 FKBP7Q9Y680 259 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 TMEM212A6NML5 194 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 A8MVM7 634 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 CENPBD1B2RD01 187 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 H3BSH0 61 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 GABARAPH6UMI1 98 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 PHYHO14832 338 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 FABP7O15540 132 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 ZNF780AO75290 641 aaPredicted RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 ZNF432O94892 652 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 SNRPD2P62316 118 aaKnown RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 EIF3IQ13347 325 aaKnown RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 GSG1Q2KHT4 349 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 GRINAQ7Z429 371 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 DND1Q8IYX4 353 aaKnown RBP13.49□□□□□ -0.25
TPM3-208ENST00000341485 OR2Y1Q8NGV0 311 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 DUSP19Q8WTR2 217 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 LRFN3Q9BTN0 628 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 MRI1Q9BV20 369 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 COMMD4Q9H0A8 199 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 RCE1Q9Y256 329 aa13.49□□□□□ -0.25
TPM3-208ENST00000341485 IGLV1-36A0A0B4J1U3 117 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 HSPB2A8KAH6 182 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 ZNF593O00488 134 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 GMDSO60547 372 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 KLF7O75840 302 aaPredicted RBP13.48□□□□□ -0.25
TPM3-208ENST00000341485 ZFAND5O76080 213 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 UMODP07911 640 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 CCR9P51686 369 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 RAG2P55895 527 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 HSPB2Q16082 182 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 TMEM255AQ5JRV8 349 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 CD276Q5ZPR3 534 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 TMPRSS12Q86WS5 348 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 GIMAP1Q8WWP7 306 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 PHF21AQ96BD5 680 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 HAVCR1Q96D42 359 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 TXNIPQ9H3M7 391 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 HRASLSQ9HDD0 168 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 EMC7Q9NPA0 242 aa13.48□□□□□ -0.25
TPM3-208ENST00000341485 MRPL22Q9NWU5 206 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms