RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IL20Q9NYY1 176 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 CISD1Q9NZ45 108 aaKnown RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 PDP1Q9P0J1 537 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-201ENST00000340074 MOKQ9UQ07 419 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 CDH10Q9Y6N8 788 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ARID1AO14497 2285 aa13.26□□□□□ -0.29
UBE3B-201ENST00000340074 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 E7EQL1 145 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 ATP6V1G2-DDX39BF2Z307 99 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 ARPC3O15145 178 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 SOX14O95416 240 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-201ENST00000340074 NPR2P20594 1047 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 GSTM3P21266 225 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 MRPS34P82930 218 aaKnown RBP13.25□□□□□ -0.29
UBE3B-201ENST00000340074 NAAAQ02083 359 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 B3GLCTQ6Y288 498 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 SLC16A14Q7RTX9 510 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 ADCK1Q86TW2 530 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 OR52L1Q8NGH7 329 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 OR8D4Q8NGM9 314 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 KCNS3Q9BQ31 491 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 SIAEQ9HAT2 523 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 NTN4Q9HB63 628 aa13.25□□□□□ -0.29
UBE3B-201ENST00000340074 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
UBE3B-201ENST00000340074 A0A1W2PPL8 197 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 DEAF1O75398 565 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 RAB36O95755 333 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 CRYAAP02489 173 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 HIST1H1CP16403 213 aaKnown RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 CTLA4P16410 223 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF14P17017 642 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 NOS3P29474 1203 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 CALCRP30988 508 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 SGCAQ16586 387 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 DEFB113Q30KQ7 82 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 PGGHGQ32M88 737 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 SLC36A2Q495M3 483 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 FOXL2NBQ6ZUU3 175 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 OR4K13Q8NH42 304 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 SMAP2Q8WU79 429 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 PIGTQ969N2 578 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 DUS3LQ96G46 650 aaKnown RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 RERGLQ9H628 205 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 RNF121Q9H920 327 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 ARMC1Q9NVT9 282 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-201ENST00000340074 LAMP3Q9UQV4 416 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 AP4S1Q9Y587 144 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 ATP23Q9Y6H3 246 aa13.24□□□□□ -0.29
UBE3B-201ENST00000340074 BHLHE40O14503 412 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 IDH3BO43837 385 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 MGRN1O60291 552 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 SLC16A7O60669 478 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 TP53P04637 393 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-201ENST00000340074 SOD3P08294 240 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 DANCRP0C864 163 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 PRKACGP22612 351 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 LAP3P28838 519 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 GUCA1AP43080 201 aaPredicted RBP13.23□□□□□ -0.29
UBE3B-201ENST00000340074 ART1P52961 327 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 RAB39AQ14964 217 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 FAM27BQ5VT28 67 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 CD300LDQ6UXZ3 194 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 JAZF1Q86VZ6 243 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 ZNF584Q8IVC4 421 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 IGFBPL1Q8WX77 278 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 FOXN4Q96NZ1 517 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 NMNAT3Q96T66 252 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 DHRS9Q9BPW9 319 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 NUAK2Q9H093 628 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 TBC1D23Q9NUY8 699 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 ARFGEF3Q5TH69 2177 aa13.23□□□□□ -0.29
UBE3B-201ENST00000340074 IGHV2OR16-5A0A0B4J2B6 119 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SCG5P05408 212 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 MMP7P09237 267 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 ARHGDIAP52565 204 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 COX10Q12887 443 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 KPNB1Q14974 876 aaKnown RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 ATP6AP1Q15904 470 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 TMEM53Q6P2H8 277 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 IL17RDQ8NFM7 739 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 OR52E2Q8NGJ4 325 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 FBXO17Q96EF6 278 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 TSSK2Q96PF2 358 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 TSSK6Q9BXA6 273 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 KCNN2Q9H2S1 579 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 POLE4Q9NR33 117 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 REV1Q9UBZ9 1251 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 COA3Q9Y2R0 106 aaPredicted RBP13.22□□□□□ -0.29
UBE3B-201ENST00000340074 DCTN6O00399 190 aa13.22□□□□□ -0.29
UBE3B-201ENST00000340074 KHDRBS3O75525 346 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms