RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 CMTM3Q96MX0 182 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 GSX2Q9BZM3 304 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 LEFTY2O00292 366 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 AREGP15514 252 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 PTBP1P26599 531 aaKnown RBP eCLIP11.88□□□□□ -0.515e-7■■■■■ 32.2
USP47-202ENST00000339865 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 ZNF280AP59817 542 aaPredicted RBP11.88□□□□□ -0.51
USP47-202ENST00000339865 GDPD3Q7L5L3 318 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 CDRT4Q8N9R6 151 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 RANBP9Q96S59 729 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
USP47-202ENST00000339865 ALX3O95076 343 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 TGFBR1P36897 503 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 HBA1P69905 142 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 SLC7A6Q92536 515 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 GATA6Q92908 595 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 FYTTD1Q96QD9 318 aaKnown RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 BARHL1Q9BZE3 327 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 NFS1Q9Y697 457 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 UBL3O95164 117 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 CDC20BQ86Y33 519 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 CHRDL1Q9BU40 450 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 MN1Q10571 1320 aaPredicted RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 PRAMEF25A6NGN4 478 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 WTIPA6NIX2 430 aaPredicted RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 LRRC3CA6NJW4 275 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 MAN2B1O00754 1011 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 SLC43A1O75387 559 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 DEDDO75618 318 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 F11P03951 625 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 PRAMEF5Q5TYX0 476 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 RPL22L1Q6P5R6 122 aaKnown RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 VRK2Q86Y07 508 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 FAM131CQ96AQ9 280 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 NAA50Q9GZZ1 169 aaKnown RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 K7ERU9 68 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 FCGR2CP31995 323 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 PGGHGQ32M88 737 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 UBE3DQ7Z6J8 389 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 KCNG3Q8TAE7 436 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 LHX4Q969G2 390 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 MRPL33O75394 65 aaKnown RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 PLK5Q496M5 336 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 CPZQ66K79 652 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 OPN5Q6U736 354 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 NRG4Q8WWG1 115 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 BTNL2Q9UIR0 455 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 A0A087X0M5 115 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 A0A1B0GX30 115 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 PIRO00625 290 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 NAGAP17050 411 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 GCSHP23434 173 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 ZNF133P52736 654 aaPredicted RBP11.87□□□□□ -0.51
USP47-202ENST00000339865 CASP7P55210 303 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 JAG1P78504 1218 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 WBP2NLQ6ICG8 309 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 GRAMD2AQ8IUY3 354 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 TMEM59LQ9UK28 342 aa11.87□□□□□ -0.51
USP47-202ENST00000339865 GPR31O00270 319 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 GPR32O75388 356 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 S1PR4O95977 384 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 RBP2P50120 134 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 HBMQ6B0K9 141 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 PRSS35Q8N3Z0 413 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ABHD4Q8TB40 342 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CD200R1Q8TD46 325 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CLSTN3Q9BQT9 956 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ULBP3Q9BZM4 244 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ASIC5Q9NY37 505 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 OBP2AQ9NY56 170 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ABCD4O14678 606 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CMPK2Q5EBM0 449 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 LCTLQ6UWM7 567 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 SLC22A24Q8N4F4 322 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 RAB7BQ96AH8 199 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 TRBV11-1A0A0K0K1C0 115 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ADAM11O75078 769 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 NUDT3O95989 172 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 GYPAP02724 150 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ABCD3P28288 659 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 CD276Q5ZPR3 534 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 A0A1W2PQU0 124 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 TBX19O60806 448 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
USP47-202ENST00000339865 EVX2Q03828 476 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 OR2B11Q5JQS5 317 aa11.86□□□□□ -0.51
USP47-202ENST00000339865 OR52R1Q8NGF1 315 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms