RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 BEST3Q8N1M1 668 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 MS4A15Q8N5U1 240 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF433Q8N7K0 673 aaPredicted RBP6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 SAMD12Q8N8I0 201 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 OR4M2Q8NGB6 313 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 OR1J4Q8NGS1 313 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 OR2G2Q8NGZ5 317 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 THOC3Q96J01 351 aaKnown RBP6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 KLHL15Q96M94 604 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 ABHD6Q9BV23 337 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 PPP1R3EQ9H7J1 279 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 PTGES2Q9H7Z7 377 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 CPNE5Q9HCH3 593 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 BRD7Q9NPI1 651 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 STMN3Q9NZ72 180 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 FKBP7Q9Y680 259 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 DOCK7Q96N67 2140 aa6.61□□□□□ -1.35
SRFBP1-201ENST00000339397 TRAV8-7A0A075B6U6 113 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 SULT2B1O00204 365 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 EIF1AYO14602 144 aaKnown RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 LANCL1O43813 399 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 LIFP15018 202 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 KIR3DL2P43630 455 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 RFX2P48378 723 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 CD97P48960 835 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 DLX5P56178 289 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ALKBH1Q13686 389 aaKnown RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 WDR38Q5JTN6 314 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 TIGD3Q6B0B8 471 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 DEFB124Q8NES8 71 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 LIN37Q96GY3 246 aaPredicted RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 SOSTQ9BQB4 213 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 NEURL2Q9BR09 285 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 POTEKPQ9BYX7 375 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 SACM1LQ9NTJ5 587 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 PLA2G3Q9NZ20 509 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF281Q9Y2X9 895 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 OR4C45A6NMZ5 311 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 FAM25AB3EWG3 89 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 FAM25CB3EWG5 89 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 FAM25GB3EWG6 89 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF879B4DU55 563 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 IGHMP01871 453 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 KRT8P05787 483 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 UCHL1P09936 223 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 EPXP11678 715 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ADRA2CP18825 462 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 RAB3BP20337 219 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 NTF4P34130 210 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 RPS15P62841 145 aaKnown RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 OC90Q02509 493 aaPredicted RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ZP4Q12836 540 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 CHAF1BQ13112 559 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 IL18Q14116 193 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 EIF2B1Q14232 305 aaKnown RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 HES5Q5TA89 166 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 HBMQ6B0K9 141 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 CCBE1Q6UXH8 406 aaPredicted RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 DCXRQ7Z4W1 244 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 EGFL6Q8IUX8 553 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 UBQLNLQ8IYU4 475 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 DRAXINQ8NBI3 349 aaPredicted RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC26A10Q8NG04 563 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 OR5AK2Q8NH90 309 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 SIGLEC12Q96PQ1 595 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 MRPL13Q9BYD1 178 aaKnown RBP6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 ALKBH4Q9NXW9 302 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 B3GALT5Q9Y2C3 310 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 UGT2A1Q9Y4X1 527 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 BSNQ9UPA5 3926 aa6.6□□□□□ -1.35
SRFBP1-201ENST00000339397 A0A0J9YW62 118 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TNFSF11O14788 317 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 PLA2G10O15496 165 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TRAF3IP2O43734 574 aaPredicted RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 CYC1P08574 325 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 GAAP10253 952 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 GALP22466 123 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 MYL9P24844 172 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 GLO1Q04760 184 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 PLA2G7Q13093 441 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC17A1Q14916 467 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 RSPO4Q2I0M5 234 aaPredicted RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 CCDC58Q4VC31 144 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 UNQ9370/PRO34162Q6UXP9 181 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 LINC00696Q6ZRV3 163 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TMPPEQ6ZT21 453 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 IZUMO1Q8IYV9 350 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SCAIQ8N9R8 606 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 OR4M1Q8NGD0 313 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 RPS4Y2Q8TD47 263 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 GCDHQ92947 438 aaPredicted RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 NTNG2Q96CW9 530 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF385AQ96PM9 386 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 ABHD1Q96SE0 405 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 DDA1Q9BW61 102 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 EMC7Q9NPA0 242 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 FREM1Q5H8C1 2179 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 SNPHO15079 494 aa6.59□□□□□ -1.35
SRFBP1-201ENST00000339397 LMX1BO60663 402 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms