RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ENKURQ8TC29 256 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 TSEN15Q8WW01 171 aaKnown RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 WDFY2Q96P53 400 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 GPX7Q96SL4 187 aaPredicted RBP11.29□□□□□ -0.6
LIMK1-201ENST00000336180 CCDC32Q9BV29 185 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 INPP5EQ9NRR6 644 aa11.29□□□□□ -0.6
LIMK1-201ENST00000336180 A0A0B4J293 547 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 A0A1W2PPL8 197 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 OGG1O15527 345 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 FZD7O75084 574 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 NPIPB7O75200 414 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 PTTG1O95997 202 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 PNLIPP16233 465 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SRMP19623 302 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ANOS1P23352 680 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 WDR38Q5JTN6 314 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 KCTD20Q7Z5Y7 419 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 WDSUB1Q8N9V3 476 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 OR5AK2Q8NH90 309 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 WIF1Q9Y5W5 379 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 PTPRZ1P23471 2315 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 CCDC163A0A0D9SF12 145 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 C9J4A7 227 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 EPXP11678 715 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ALOX5APP20292 161 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 PRSS12P56730 875 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 GGTLC2Q14390 218 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ANGPT1Q15389 498 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 YOD1Q5VVQ6 348 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 MZT2AQ6P582 158 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 RPL22L1Q6P5R6 122 aaKnown RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 DHRS13Q6UX07 377 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 CDC20BQ86Y33 519 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 OR11G2Q8NGC1 345 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SPACA9Q96E40 222 aaPredicted RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 LOXL2Q9Y4K0 774 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 PCDHGB7Q9Y5F8 929 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ANKUB1A6NFN9 424 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 CENPBD1B2RD01 187 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SMLR1H3BR10 107 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 CCNKO75909 580 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SP9P0CG40 484 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 ADRA2CP18825 462 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 KIR3DL2P43630 455 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 GNG2P59768 71 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 NUP54Q7Z3B4 507 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 TMPRSS12Q86WS5 348 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 OR5L2Q8NGL0 311 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 TMEM234Q8WY98 164 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
LIMK1-201ENST00000336180 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
LIMK1-201ENST00000336180 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.6
LIMK1-201ENST00000336180 NSG1A0A0A6YYJ2 146 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF879B4DU55 563 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
LIMK1-201ENST00000336180 SEC14L5O43304 696 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ALX3O95076 343 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 SYPP08247 313 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 COX6A1P12074 109 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 RAB15P59190 212 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 TAS2R43P59537 309 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ALKBH1Q13686 389 aaKnown RBP11.27□□□□□ -0.61
LIMK1-201ENST00000336180 EFR3AQ14156 821 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 PLPPR5Q32ZL2 321 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 TMEM205Q6UW68 189 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 DCXRQ7Z4W1 244 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 PXKQ7Z7A4 578 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 CCDC28AQ8IWP9 274 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 PLPP7Q8NBV4 271 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF248Q8NDW4 579 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 OR2G2Q8NGZ5 317 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 KLHL15Q96M94 604 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 TXNIPQ9H3M7 391 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 IFT22Q9H7X7 185 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 CACNA1GO43497 2377 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 IGHV1-45A0A0A0MS14 117 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 FAM240BA0A1B0GVZ2 78 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 SC5DO75845 299 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 FGF5P12034 268 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 TALDO1P37837 337 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 AGFG1P52594 562 aaKnown RBP11.27□□□□□ -0.61
LIMK1-201ENST00000336180 HSF1Q00613 529 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 BDH1Q02338 343 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 YRDCQ86U90 279 aaKnown RBP11.27□□□□□ -0.61
LIMK1-201ENST00000336180 NUBPLQ8TB37 319 aa11.27□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF519Q8TB69 540 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms