RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 AHSA2Q719I0 299 aa18.95■□□□□ 0.62
TPM1-204ENST00000334895 SLC26A10Q8NG04 563 aa18.95■□□□□ 0.62
TPM1-204ENST00000334895 OR4F15Q8NGB8 312 aa18.95■□□□□ 0.62
TPM1-204ENST00000334895 OR51G2Q8NGK0 314 aa18.95■□□□□ 0.62
TPM1-204ENST00000334895 PLSCR4Q9NRQ2 329 aa18.95■□□□□ 0.62
TPM1-204ENST00000334895 PTGES3LE9PB15 166 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 RPL36A-HNRNPH2H7BZ11 118 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 SELENOFO60613 162 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 MRPL3P09001 348 aaKnown RBP18.94■□□□□ 0.62
TPM1-204ENST00000334895 PSKH1P11801 424 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 CTSSP25774 331 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 UQCRFS1P47985 274 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 CENPAP49450 140 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 MVKQ03426 396 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 GLO1Q04760 184 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 PIGFQ07326 219 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 MEP1BQ16820 701 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 CEACAM16Q2WEN9 425 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 LCN1P1Q5VSP4 162 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 FBXW9Q5XUX1 488 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 FOXL2NBQ6ZUU3 175 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 GLB1L2Q8IW92 636 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 TIGD4Q8IY51 512 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 GALNT11Q8NCW6 608 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 ZNF540Q8NDQ6 660 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 SMAP2Q8WU79 429 aaPredicted RBP18.94■□□□□ 0.62
TPM1-204ENST00000334895 SFXN3Q9BWM7 321 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 RBM24Q9BX46 236 aaKnown RBP18.94■□□□□ 0.62
TPM1-204ENST00000334895 WDR76Q9H967 626 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 MARCH7Q9H992 704 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 B3GAT2Q9NPZ5 323 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 SCN3BQ9NY72 215 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 TPRKBQ9Y3C4 175 aa18.94■□□□□ 0.62
TPM1-204ENST00000334895 A0A1W2PPL8 197 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 J3QRE1 110 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 HTR1AP08908 422 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 SBK2P0C263 348 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 PIPP12273 146 aaPredicted RBP18.93■□□□□ 0.62
TPM1-204ENST00000334895 LAP3P28838 519 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 FAPQ12884 760 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 KCTD21Q4G0X4 260 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 UBE2J2Q8N2K1 259 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 OR52I1Q8NGK6 324 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 SIGLEC11Q96RL6 698 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 CNOT2Q9NZN8 540 aaKnown RBP18.93■□□□□ 0.62
TPM1-204ENST00000334895 UPB1Q9UBR1 384 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 EXOGQ9Y2C4 368 aaKnown RBP18.93■□□□□ 0.62
TPM1-204ENST00000334895 COMMD3-BMI1R4GMX3 469 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 HIVEP3Q5T1R4 2406 aa18.93■□□□□ 0.62
TPM1-204ENST00000334895 ZNF587BE7ETH6 402 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 KRT33AO76009 404 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 TNFAIP8O95379 198 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 LYNP07948 512 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 NAA10P41227 235 aaPredicted RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 CDH15P55291 814 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 HSF2Q03933 536 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 ATCAYQ86WG3 371 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 C11orf40Q8WZ69 217 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 NABP1Q96AH0 204 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 OPN3Q9H1Y3 402 aaPredicted RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 ZNF696Q9H7X3 374 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 ERVK-18Q9QC07 812 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 PROCRQ9UNN8 238 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 MYO7BQ6PIF6 2116 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 EFCAB10A6NFE3 127 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 HSPB2A8KAH6 182 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 SEC14L2O76054 403 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 RPSAP08865 295 aaKnown RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 CD8BP10966 210 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 GNLYP22749 145 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 GABARAPL2P60520 117 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 ST3GAL4Q11206 333 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 RAB40BQ12829 278 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 HSPB2Q16082 182 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 ZNF610Q8N9Z0 462 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 CNN2Q99439 309 aaKnown RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 COPS4Q9BT78 406 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 SEC61A2Q9H9S3 476 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 FGF20Q9NP95 211 aaPredicted RBP18.92■□□□□ 0.62
TPM1-204ENST00000334895 POLE4Q9NR33 117 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 TMEM38BQ9NVV0 291 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 BLOC1S6Q9UL45 172 aa18.92■□□□□ 0.62
TPM1-204ENST00000334895 PCNX1Q96RV3 2341 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 CCL21O00585 134 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 IL18BPO95998 194 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 HLA-DQA2P01906 255 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 ITGA5P08648 1049 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 C21orf33P30042 268 aaPredicted RBP18.91■□□□□ 0.62
TPM1-204ENST00000334895 RPS27P42677 84 aaKnown RBP18.91■□□□□ 0.62
TPM1-204ENST00000334895 ZNF84P51523 738 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 BLVRAP53004 296 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 HCCSP53701 268 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 C9orf135Q5VTT2 229 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 TMEM211Q6ICI0 200 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 ERI1Q8IV48 349 aaKnown RBP18.91■□□□□ 0.62
TPM1-204ENST00000334895 LIX1LQ8IVB5 337 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 IPCEF1Q8WWN9 437 aaPredicted RBP18.91■□□□□ 0.62
TPM1-204ENST00000334895 EMC7Q9NPA0 242 aa18.91■□□□□ 0.62
TPM1-204ENST00000334895 J3QKU1 62 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms