RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 IGHV4-34P06331 123 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 LIPCP11150 499 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 EIF4EBP2Q13542 120 aaPredicted RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 OR8B8Q15620 311 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 YIF1BQ5BJH7 314 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 FAM76BQ5HYJ3 339 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 SLC46A3Q7Z3Q1 461 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 SULF2Q8IWU5 870 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 OR2V1Q8NHB1 315 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 GPR119Q8TDV5 335 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 RAB3CQ96E17 227 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 VRK1Q99986 396 aaPredicted RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 RANBP3Q9H6Z4 567 aaPredicted RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 PTTG1O95997 202 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 CAV2P51636 162 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 GNRHR2Q96P88 292 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 TRGV5A0A0B4J1U4 118 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 BET1O15155 118 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 SLC14A1Q13336 389 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF766Q5HY98 468 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 WFDC8Q8IUA0 241 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 FAM26EQ8N5C1 309 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 TXNIPQ9H3M7 391 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 SLC6A13Q9NSD5 602 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 SNAPC5O75971 98 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 AGTR1P30556 359 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 RPS27P42677 84 aaKnown RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 TAS2R31P59538 309 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 AGERQ15109 404 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 OR5M9Q8NGP3 310 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 B3GAT1Q9P2W7 334 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 MYOTQ9UBF9 498 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 ANKUB1A6NFN9 424 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 RPS23P62266 143 aaKnown RBP13.65□□□□□ -0.22
C9orf47-201ENST00000334490 ZMAT1Q5H9K5 638 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 PMS2CLQ68D20 193 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 METAP1DQ6UB28 335 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-201ENST00000334490 OR1S1Q8NH92 325 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 GLYATL2Q8WU03 294 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 RNF170Q96K19 258 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 CENPOQ9BU64 300 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 FBXO4Q9UKT5 387 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 CEP250Q9BV73 2442 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 TAS2R19P59542 299 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 DEFA5Q01523 94 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 FGFBP1Q14512 234 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 GLYATL3Q5SZD4 288 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 PLPP7Q8NBV4 271 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 LGALS14Q8TCE9 139 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 STK35Q8TDR2 534 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 LAP3P28838 519 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 DIO1P49895 249 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 HCCSP53701 268 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 ISL1P61371 349 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 ANKRD34AQ69YU3 496 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-201ENST00000334490 C16orf47Q6ZP98 133 aaPredicted RBP13.65□□□□□ -0.22
C9orf47-201ENST00000334490 RIMKLAQ8IXN7 391 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 LSM5Q9Y4Y9 91 aaKnown RBP13.65□□□□□ -0.22
C9orf47-201ENST00000334490 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 GMEB1Q9Y692 573 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 PRSS37A4D1T9 235 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 UPK1BO75841 260 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 SERPINA7P05543 415 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 EDDM3BP56851 147 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 SFXN4Q6P4A7 337 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 BPIFB2Q8N4F0 458 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 SEMA6DQ8NFY4 1073 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 ZFP57Q9NU63 452 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 FKBP14Q9NWM8 211 aa13.65□□□□□ -0.22
C9orf47-201ENST00000334490 FUOMA2VDF0 154 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 TBX19O60806 448 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 GAAP10253 952 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 CPT2P23786 658 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 CYCSP99999 105 aaKnown RBP13.64□□□□□ -0.23
C9orf47-201ENST00000334490 LCN10Q6JVE6 187 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 ACOXLQ9NUZ1 547 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 NDRG3Q9UGV2 375 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 LRRC30A6NM36 301 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 GOSR2O14653 212 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF628Q5EBL2 1059 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 METTL11BQ5VVY1 283 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 SLC22A25Q6T423 547 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 OR51D1Q8NGF3 324 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 RDH8Q9NYR8 311 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 RCE1Q9Y256 329 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 CD300LBA8K4G0 201 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 M0R135 149 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 SC5DO75845 299 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 C1QAP02745 245 aa13.64□□□□□ -0.23
C9orf47-201ENST00000334490 MTNR1BP49286 362 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms