RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 NNATQ16517 81 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 C2orf76Q3KRA6 126 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 NKAIN2Q5VXU1 208 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 OTPQ5XKR4 325 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 ARL6IP6Q8N6S5 226 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 CPNE2Q96FN4 548 aaPredicted RBP12.47□□□□□ -0.41
SYNE3-201ENST00000334258 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
SYNE3-201ENST00000334258 DAPP1Q9UN19 280 aa12.47□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF705EA8MWA4 302 aaPredicted RBP12.46□□□□□ -0.41
SYNE3-201ENST00000334258 EEF1E1-BLOC1S5C9J1V9 151 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 FGF17O60258 216 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.41
SYNE3-201ENST00000334258 SNAPINO95295 136 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 CYB5AP00167 134 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 SPP1P10451 314 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF28P17035 718 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 VAMP1P23763 118 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 AQP2P41181 271 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 TAS2R19P59542 299 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 PLAURQ03405 335 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 DHRS2Q13268 280 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 OR7A5Q15622 319 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 RAB11BQ15907 218 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 PRRT3Q5FWE3 981 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 SLC35D3Q5M8T2 416 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 USP53Q70EK8 1073 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 KCTD9Q7L273 389 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 DMRTC2Q8IXT2 367 aaPredicted RBP12.46□□□□□ -0.41
SYNE3-201ENST00000334258 CLEC1AQ8NC01 280 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 WDR77Q9BQA1 342 aaPredicted RBP12.46□□□□□ -0.41
SYNE3-201ENST00000334258 TNFSF18Q9UNG2 199 aa12.46□□□□□ -0.41
SYNE3-201ENST00000334258 GATCO43716 136 aaKnown RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 SRPX2O60687 465 aaPredicted RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM127O75204 238 aa12.46□□□□□ -0.42
SYNE3-201ENST00000334258 ADH1CP00326 375 aa12.46□□□□□ -0.42
SYNE3-201ENST00000334258 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 RBM34P42696 430 aaKnown RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 CDKN2AP42771 156 aaKnown RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.42
SYNE3-201ENST00000334258 CD163Q86VB7 1156 aa12.46□□□□□ -0.42
SYNE3-201ENST00000334258 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.42
SYNE3-201ENST00000334258 POM121BA6NF01 834 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 OR10H2O60403 315 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 HTR3BO95264 441 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 LY86O95711 162 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 KLK3P07288 261 aaPredicted RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CSF2RBP32927 897 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ADAM8P78325 824 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 UQCC3Q6UW78 93 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 VITQ6UXI7 678 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 DPY19L4Q7Z388 723 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 PLPP7Q8NBV4 271 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 OR2G2Q8NGZ5 317 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 NKD1Q969G9 470 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CRB3Q9BUF7 120 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 MIOXQ9UGB7 285 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SPACA6W5XKT8 324 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 A0A1B0GTQ1 180 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 A0A1B0GV90 55 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF736B4DX44 427 aaPredicted RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 FARS2O95363 451 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 WNT11O96014 354 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 F13BP05160 661 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 RFC3P40938 356 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ACAA2P42765 397 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 GRK6P43250 576 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ZCCHC12Q6PEW1 402 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 RD3Q7Z3Z2 195 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 LRFN5Q96NI6 719 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SLC25A21Q9BQT8 299 aaPredicted RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SFXN1Q9H9B4 322 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 C5orf51A6NDU8 294 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 UPK3AO75631 287 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 HLA-DQA2P01906 255 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ITGB2P05107 769 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CRYBA1P05813 215 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 ITGA5P08648 1049 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CT62P0C5K7 136 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 CCR4P51679 360 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 PGDP52209 483 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 RPS15AP62244 130 aaKnown RBP12.45□□□□□ -0.42
SYNE3-201ENST00000334258 C9orf152Q5JTZ5 239 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 BEND4Q6ZU67 534 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 SLC16A9Q7RTY1 509 aa12.45□□□□□ -0.42
SYNE3-201ENST00000334258 OR5T3Q8NGG3 340 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms