RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 EIF2B1Q14232 305 aaKnown RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 ELFN2Q5R3F8 820 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 OLFML2AQ68BL7 652 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 GUSBP11Q6P575 273 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 GLB1L2Q8IW92 636 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 THRSPQ92748 146 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 HLA-CQ95604 372 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 PPP1R14AQ96A00 147 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ARL5BQ96KC2 179 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ABHD6Q9BV23 337 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 FLVCR2Q9UPI3 526 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 LY6G6EA0A0G2JKS1 128 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 CPED1A4D0V7 1026 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 TMEM200CA6NKL6 621 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 ACOT7O00154 380 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 PEX14O75381 377 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 GLSO94925 669 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 SULT1A3P0DMM9 295 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 SULT1A4P0DMN0 295 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 PNLIPP16233 465 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 EPHA8P29322 1005 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 CRABP1P29762 137 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 CCKBRP32239 447 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 SUMO3P55854 103 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 GALK2Q01415 458 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 MFGE8Q08431 387 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 ZP4Q12836 540 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 KCTD18Q6PI47 426 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 PAPD4Q6PIY7 484 aaKnown RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 DNM1P46Q6ZS02 220 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 MDGA2Q7Z553 956 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 FGD2Q7Z6J4 655 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 KRT77Q7Z794 578 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 ASB10Q8WXI3 467 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 PMEPA1Q969W9 287 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 NXPE2Q96DL1 559 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 BEX1Q9HBH7 125 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 MED11Q9P086 117 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 PPIEQ9UNP9 301 aaKnown RBP13.08□□□□□ -0.32
TPM3-206ENST00000330188 U3KQA8 63 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 CACNA1CQ13936 2221 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 FREM3P0C091 2139 aa13.08□□□□□ -0.32
TPM3-206ENST00000330188 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 A0A1W2PQM1 296 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 ANKRD34BA5PLL1 514 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 RAD1O60671 282 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 SCRG1O75711 98 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 MPZL1O95297 269 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 PSMB1P20618 241 aaKnown RBP13.07□□□□□ -0.32
TPM3-206ENST00000330188 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
TPM3-206ENST00000330188 RIDAP52758 137 aaKnown RBP13.07□□□□□ -0.32
TPM3-206ENST00000330188 DLX5P56178 289 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 GLO1Q04760 184 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 OR7A5Q15622 319 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 OR7E24Q6IFN5 339 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 CDH24Q86UP0 819 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 WDFY1Q8IWB7 410 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 C15orf40Q8WUR7 153 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 RANBP3Q9H6Z4 567 aaPredicted RBP13.07□□□□□ -0.32
TPM3-206ENST00000330188 GTF2A1LQ9UNN4 478 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 LRP12Q9Y561 859 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 HRH3Q9Y5N1 445 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 ARPC4-TTLL3A0A0A6YYG9 625 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 TPPPO94811 219 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 HPXP02790 462 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 PTGS2P35354 604 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 CCL7P80098 99 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 FOXF1Q12946 379 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 NR0B2Q15466 257 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 CREB3L2Q70SY1 520 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 CATSPERDQ86XM0 798 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 ZNF248Q8NDW4 579 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 MFSD8Q8NHS3 518 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 RNF138Q8WVD3 245 aa13.07□□□□□ -0.32
TPM3-206ENST00000330188 DACT3Q96B18 629 aaPredicted RBP13.07□□□□□ -0.32
TPM3-206ENST00000330188 MEIKINA0A087WXM9 373 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 A6NIZ1 184 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 XRCC3O43542 346 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 IFNGR1P15260 489 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 DCTDP32321 178 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 EFNB2P52799 333 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 EMP2P54851 167 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 RAP1BP61224 184 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 RAP1AP62834 184 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 DCDP81605 110 aaKnown RBP13.06□□□□□ -0.32
TPM3-206ENST00000330188 FMODQ06828 376 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 ZNF385CQ66K41 422 aaPredicted RBP13.06□□□□□ -0.32
TPM3-206ENST00000330188 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
TPM3-206ENST00000330188 H1FNTQ75WM6 255 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms