RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CD47Q08722 323 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 RASGEF1BQ0VAM2 473 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 IRF3Q14653 427 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SWI5Q1ZZU3 235 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 GPAT3Q53EU6 434 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 KLHL17Q6TDP4 642 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 DGAT2L6Q6ZPD8 337 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 PRSS48Q7RTY5 328 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 GTF2IRD2Q86UP8 949 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 TMEM86BQ8N661 226 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 OR6T1Q8NGN1 323 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SLC7A13Q8TCU3 470 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 APH1BQ8WW43 257 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 PRSS27Q9BQR3 290 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 IL20Q9NYY1 176 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 KCNE5Q9UJ90 142 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 NUP50Q9UKX7 468 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 BAIAP2Q9UQB8 552 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SCN3AQ9NY46 2000 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ARPC4-TTLL3A0A0A6YYG9 625 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 NPIPA5A0A0B4J1W7 369 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 NPIPA7E9PJI5 369 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 M0R3G1 203 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SLC1A7O00341 560 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ABCD4O14678 606 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 TPST2O60704 377 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 BCAS1O75363 584 aaPredicted RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 WBP4O75554 376 aaKnown RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ERCC1P07992 297 aaPredicted RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 NPIPA8P0DM63 369 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 APOBEC3AP31941 199 aaPredicted RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ACAA2P42765 397 aaKnown RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SLC9A3P48764 834 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 MAP2K6P52564 334 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 UGT2B15P54855 530 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 CDH12P55289 794 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 CLDN18P56856 261 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 OLR1P78380 273 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 SLC13A2Q13183 592 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 CTU2Q2VPK5 515 aaKnown RBP5.73□□□□□ -1.49
CSTF3-201ENST00000323959 PRAMEF20Q5VT98 475 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 UBE2UQ5VVX9 321 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 C5orf46Q6UWT4 87 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ENTHD1Q8IYW4 607 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ZNF527Q8NB42 609 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 Q96MT0 163 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 TMEM43Q9BTV4 400 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 FNDC11Q9BVV2 318 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 CDCA4Q9BXL8 241 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 PRRG3Q9BZD7 231 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 LAT2Q9GZY6 243 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 FN3KQ9H479 309 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 ISYNA1Q9NPH2 558 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 KIF17Q9P2E2 1029 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 MKLN1Q9UL63 735 aa5.73□□□□□ -1.49
CSTF3-201ENST00000323959 TRBV4-1A0A0J9YWV2 114 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 OR6C70A6NIJ9 312 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 A8MUA0 341 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 AP3D1O14617 1153 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 TP53I11O14683 189 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 CDC123O75794 336 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GASTP01350 101 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 OPN1SWP03999 348 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GRK5P34947 590 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 TMBIM6P55061 237 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 EFR3AQ14156 821 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 EBPQ15125 230 aaKnown RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 OTUD3Q5T2D3 398 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GALNT10Q86SR1 603 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 SLC44A2Q8IWA5 706 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 IQCF2Q8IXL9 164 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 SVOPQ8N4V2 548 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 OR13F1Q8NGS4 319 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 SLC2A12Q8TD20 617 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 DNAJA4Q8WW22 397 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 MUL1Q969V5 352 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GPX7Q96SL4 187 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 RAB1BQ9H0U4 201 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 PLGRKTQ9HBL7 147 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GLRX2Q9NS18 164 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 PSORS1C1Q9UIG5 152 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 GMPPBQ9Y5P6 360 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 CLDN24A6NM45 220 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 C17orf105B2RV13 164 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 ALG1L2C9J202 215 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 FCMRO60667 390 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 SS18L1O75177 396 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 IGKV1D-16P01601 117 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 MT-ND1P03886 318 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 THY1P04216 161 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 PTAFRP25105 342 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 AQP1P29972 269 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 CAPZA2P47755 286 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 CDC42P60953 191 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 SRYQ05066 204 aa5.72□□□□□ -1.49
CSTF3-201ENST00000323959 ZNF155Q12901 538 aaPredicted RBP5.72□□□□□ -1.49
CSTF3-201ENST00000323959 TBCEQ15813 527 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms