RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LINC00587B1AMM8 73 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SERPINA5P05154 406 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 QDPRP09417 244 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SFTPCP11686 197 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 IFITM3Q01628 133 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR5M1Q8NGP8 315 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM210A6NLX4 147 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 E5RGE8 158 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SOCS6O14544 535 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ITGB7P26010 798 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SLC35A1P78382 337 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 OR8G1Q15617 311 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF280BQ86YH2 543 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 PRSS35Q8N3Z0 413 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 PGAM5Q96HS1 289 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 LMF2Q9BU23 707 aaKnown RBP6.51□□□□□ -1.37
SMC1A-201ENST00000322213 SLC25A19Q9HC21 320 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 NCDNQ9UBB6 729 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 NSG2Q9Y328 171 aa6.51□□□□□ -1.37
SMC1A-201ENST00000322213 TCRBV16S1A1N1A0A5B0 115 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ANKRD61A6NGH8 418 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SERPINE2P07093 398 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 EPHA4P54764 986 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SERTAD2Q14140 314 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MIDNQ504T8 468 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 NLGN4YQ8NFZ3 816 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 FGF20Q9NP95 211 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 LPAR3Q9UBY5 353 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM218A2RU14 115 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PRSS23O95084 383 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HLA-DOBP13765 273 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF25P17030 456 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HAGHQ16775 308 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 C4orf17Q53FE4 359 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM207Q6UWW9 146 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PLEKHB1Q9UF11 243 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CA14Q9ULX7 337 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 A0A1W2PPH5 198 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HSPB2A8KAH6 182 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HIDE1A8MVS5 230 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MPIG6BO95866 241 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 OLFM2O95897 454 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 OMGP23515 440 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SOX18P35713 384 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 LIMK1P53667 647 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TPPP2P59282 170 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TPBGQ13641 420 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HSPB2Q16082 182 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF626Q68DY1 528 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CMTM4Q8IZR5 234 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ADPRHL1Q8NDY3 354 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SAT2Q96F10 170 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MS4A7Q9GZW8 240 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 TM7SF3Q9NS93 570 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 DEC1Q9P2X7 70 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 KCNG2Q9UJ96 466 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PYCARD-AS1I3L0S3 204 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 M0QYG6 137 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 HRO43593 1189 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 NDUFB6O95139 128 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PRPH2P23942 346 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 DPY19L2P2Q6ZN68 376 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 Q6ZTK2 550 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SLC22A24Q8N4F4 322 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CDRT4Q8N9R6 151 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 L3MBTL4Q8NA19 623 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 OR2G2Q8NGZ5 317 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PACRGQ96M98 296 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 OR7D2Q96RA2 312 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 LYSMD1Q96S90 227 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MSRAQ9UJ68 235 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ITGB2P05107 769 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 GALTP07902 379 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MTHFD2P13995 350 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 SGCAQ16586 387 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PCK2Q16822 640 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MDGA1Q8NFP4 955 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF75AQ96N20 296 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 GPR61Q9BZJ8 451 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 AUNIPQ9H7T9 357 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 MPTX1A8MV57 137 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 PHOX2AO14813 284 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 LRP3O75074 770 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 EPHA1P21709 976 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ARL3P36405 182 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 FABP6P51161 128 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 VAMP3Q15836 100 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ARHGAP11BQ3KRB8 267 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 FBXW12Q6X9E4 464 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 CALHM3Q86XJ0 350 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 OR14C36Q8NHC7 312 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 KCNG3Q8TAE7 436 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 ANKRD9Q96BM1 317 aaPredicted RBP6.5□□□□□ -1.37
SMC1A-201ENST00000322213 KLRG1Q96E93 195 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 BMFQ96LC9 184 aa6.5□□□□□ -1.37
SMC1A-201ENST00000322213 RNF39Q9H2S5 420 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms