RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RAP1BP61224 184 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 RAP1AP62834 184 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 GK2Q14410 553 aaPredicted RBP15.03■□□□□ -0
CLIP4-201ENST00000320081 RTL10Q7L3V2 364 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 OR2I1PQ8NGU4 316 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 LYRM4Q9HD34 91 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 SLC5A6Q9Y289 635 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 NPFFR2Q9Y5X5 522 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 MTRF1O75570 445 aaKnown RBP15.03■□□□□ -0
CLIP4-201ENST00000320081 GABRB1P18505 474 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 ATF1P18846 271 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 HTR5AP47898 357 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 CAMLGP49069 296 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 POLR2HP52434 150 aaKnown RBP15.03■□□□□ -0
CLIP4-201ENST00000320081 BAMBIQ13145 260 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 CCDC190Q86UF4 302 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 OR4K15Q8NH41 348 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 PKDREJQ9NTG1 2253 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 ZNF93P35789 620 aaPredicted RBP15.03■□□□□ -0
CLIP4-201ENST00000320081 HSD17B7P56937 341 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 CDK5R1Q15078 307 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 C1QL3Q5VWW1 255 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 YRDCQ86U90 279 aaKnown RBP15.03■□□□□ -0
CLIP4-201ENST00000320081 IL20Q9NYY1 176 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 PCDHGA5Q9Y5G8 931 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 QSER1Q2KHR3 1735 aa15.03■□□□□ -0
CLIP4-201ENST00000320081 BRINP1O60477 761 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 LALBAP00709 142 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 THBS1P07996 1170 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 DIO1P49895 249 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 PCBP3P57721 371 aaKnown RBP15.02■□□□□ -0
CLIP4-201ENST00000320081 PCBP4P57723 403 aaKnown RBP15.02■□□□□ -0
CLIP4-201ENST00000320081 UBE3DQ7Z6J8 389 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 ETFBKMTQ8IXQ9 262 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 TP53I13Q8NBR0 393 aaPredicted RBP15.02■□□□□ -0
CLIP4-201ENST00000320081 GOT1L1Q8NHS2 421 aaPredicted RBP15.02■□□□□ -0
CLIP4-201ENST00000320081 OR51E1Q8TCB6 317 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 RAB3CQ96E17 227 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 AIFM2Q9BRQ8 373 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 SLC52A3Q9NQ40 469 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 OR52A1Q9UKL2 312 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 CADP27708 2225 aa15.02■□□□□ -0
CLIP4-201ENST00000320081 NAP1L6A6NFF2 107 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 A8MVM7 634 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 SOD1P00441 154 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 FOLR3P41439 243 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 TSFMP43897 325 aaKnown RBP15.02□□□□□ -0.01
CLIP4-201ENST00000320081 LUMP51884 338 aaPredicted RBP15.02□□□□□ -0.01
CLIP4-201ENST00000320081 ASAH1Q13510 395 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 C14orf28Q4W4Y0 310 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 FAM199XQ6PEV8 388 aaPredicted RBP15.02□□□□□ -0.01
CLIP4-201ENST00000320081 ZNF679Q8IYX0 411 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 OR2A5Q96R48 311 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 STACQ99469 402 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 RGCCQ9H4X1 137 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 TAF1LQ8IZX4 1826 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 LOC107986453A0A1B0GWG9 222 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 C2CD4DB7Z1M9 353 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 TNFRSF10CO14798 259 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 BDKRB2P30411 391 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 CCR9P51686 369 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 ZNF362Q5T0B9 420 aaPredicted RBP15.02□□□□□ -0.01
CLIP4-201ENST00000320081 SPTSSAQ969W0 71 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 ANKRD19PQ9H560 264 aa15.02□□□□□ -0.01
CLIP4-201ENST00000320081 MRPS28Q9Y2Q9 187 aaKnown RBP15.02□□□□□ -0.01
CLIP4-201ENST00000320081 CASP8AP2Q9UKL3 1982 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 PRAF2O60831 178 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 DIRAS3O95661 229 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 IGHA2P01877 340 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 CD3DP04234 171 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 RFX2P48378 723 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 DCDP81605 110 aaKnown RBP15.01□□□□□ -0.01
CLIP4-201ENST00000320081 FMODQ06828 376 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 ECH1Q13011 328 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 TRIM61Q5EBN2 209 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 MRPL21Q7Z2W9 205 aaKnown RBP15.01□□□□□ -0.01
CLIP4-201ENST00000320081 CNEP1R1Q8N9A8 125 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 PAPOLGQ9BWT3 736 aaKnown RBP15.01□□□□□ -0.01
CLIP4-201ENST00000320081 STRADBQ9C0K7 418 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 KCNK15Q9H427 330 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 SIGLEC7Q9Y286 467 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 MIA3Q5JRA6 1907 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 RGS11O94810 467 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 ZNF14P17017 642 aaPredicted RBP15.01□□□□□ -0.01
CLIP4-201ENST00000320081 TAS2R20P59543 309 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 C17orf67Q0P5P2 114 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 HYAL1Q12794 435 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 FAM74A1Q5RGS3 127 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 C12orf73Q69YU5 71 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 RFPL4BQ6ZWI9 263 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 CAMKMTQ7Z624 323 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 GLYATL2Q8WU03 294 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 NINJ1Q92982 152 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 FCRL1Q96LA6 429 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 FSCN3Q9NQT6 498 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 SIT1Q9Y3P8 196 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 SHANK1Q9Y566 2161 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 BORCS7-ASMTA0A0B4J1R7 106 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 IGHV5-51A0A0C4DH38 117 aa15.01□□□□□ -0.01
CLIP4-201ENST00000320081 POU3F2P20265 443 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms