RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 MAOAP21397 527 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 TFF2Q03403 129 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 DUSP8Q13202 625 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 RAB11BQ15907 218 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 ARHGAP11BQ3KRB8 267 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 BHLHE23Q8NDY6 225 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 OR5D18Q8NGL1 313 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 PELOQ9BRX2 385 aaKnown RBP12.9□□□□□ -0.34
PABPC1-201ENST00000318607 OR8D2Q9GZM6 311 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.34
PABPC1-201ENST00000318607 RPS10P5Q9NQ39 176 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 TAS2R4Q9NYW5 299 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 B9D1Q9UPM9 204 aa12.9□□□□□ -0.34
PABPC1-201ENST00000318607 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 OR2M5A3KFT3 312 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 TNFSF12O43508 249 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 KNG1P01042 644 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 TACSTD2P09758 323 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 NR0B2Q15466 257 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CSRP2Q16527 193 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 FBXO42Q6P3S6 717 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 FAM71CQ8NEG0 241 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 C14orf79Q96F83 325 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 WBP1Q96G27 269 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 NAP1L6A6NFF2 107 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF208O43345 1280 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 SLC16A7O60669 478 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ADAP1O75689 374 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 HPP00738 406 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ADH6P28332 368 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CD80P33681 288 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 NOGQ13253 232 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CCDC157Q569K6 752 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 NKAPLQ5M9Q1 402 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 FIGLAQ6QHK4 219 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF584Q8IVC4 421 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 SLC35F3Q8IY50 421 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ZNF101Q8IZC7 436 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 OR2L13Q8N349 312 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
PABPC1-201ENST00000318607 PNO1Q9NRX1 252 aaKnown RBP12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 HRASLS2Q9NWW9 162 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 SLC27A6Q9Y2P4 619 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 XKRYO14609 159 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CTAG2O75638 210 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 SLC2A5P22732 501 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 NPY4RP50391 375 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 ARHGAP19Q14CB8 494 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 EBPQ15125 230 aaKnown RBP12.89□□□□□ -0.35
PABPC1-201ENST00000318607 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
PABPC1-201ENST00000318607 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 CDRT4Q8N9R6 151 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
PABPC1-201ENST00000318607 LY86O95711 162 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 SMAD4Q13485 552 aaKnown RBP12.88□□□□□ -0.35
PABPC1-201ENST00000318607 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 ADAM5Q6NVV9 412 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 COX15Q7KZN9 410 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 FAM3CQ92520 227 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-201ENST00000318607 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 FRYLO94915 3013 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 SDCBPO00560 298 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-201ENST00000318607 HCRTR2O43614 444 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 MOSPD3O75425 235 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 RAB6AP20340 208 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 CBX5P45973 191 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 FBXW4P57775 412 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 SHISA6Q6ZSJ9 500 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 SLC29A4Q7RTT9 530 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 TAF8Q7Z7C8 310 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 OR2G2Q8NGZ5 317 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 ADOQ96SZ5 270 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 CST11Q9H112 138 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 EPHX3Q9H6B9 360 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 ADAM29Q9UKF5 820 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
PABPC1-201ENST00000318607 H7C417 338 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 BET1O15155 118 aa12.87□□□□□ -0.35
PABPC1-201ENST00000318607 OGG1O15527 345 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms