RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ZNF519Q8TB69 540 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 SYNPRQ8TBG9 265 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 TMEM158Q8WZ71 300 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 HDAC2Q92769 488 aaKnown RBP15.25■□□□□ 0.03
TPM1-203ENST00000317516 RDH5Q92781 318 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 CMTM5Q96DZ9 223 aa15.25■□□□□ 0.03
TPM1-203ENST00000317516 COL6A5A8TX70 2615 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 LRP5LA4QPB2 252 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 A6NIZ1 184 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 RNF212BA8MTL3 300 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 EFCAB9A8MZ26 197 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 PIP5K1CO60331 668 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 LILRA1O75019 489 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 SLC2A10O95528 541 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 CCL2P13500 99 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 SRD5A1P18405 259 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 APEX1P27695 318 aaKnown RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 THBS2P35442 1172 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 SLC9A3P48764 834 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 TMEM33P57088 247 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 KLF3P57682 345 aaPredicted RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 RAP1BP61224 184 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 RAP1AP62834 184 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 MRPS11P82912 194 aaKnown RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 PRKCDQ05655 676 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 TOP3AQ13472 1001 aaPredicted RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 ZNF730Q6ZMV8 503 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 NRMQ8IXM6 262 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 ALDH16A1Q8IZ83 802 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 OR51A7Q8NH64 312 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 SNX33Q8WV41 574 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 ACOT11Q8WXI4 607 aaPredicted RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 NSMAFQ92636 917 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 NDEL1Q9GZM8 345 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 TAAR3PQ9P1P4 343 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 RHCGQ9UBD6 479 aa15.24■□□□□ 0.03
TPM1-203ENST00000317516 EIF3KQ9UBQ5 218 aaKnown RBP15.24■□□□□ 0.03
TPM1-203ENST00000317516 LYNX1G3V0Z9 82 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 NME4O00746 187 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 SERPINA1P01009 418 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 IGHMP01871 453 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 MT-ND5P03915 603 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 MMP7P09237 267 aaPredicted RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 LYNX1P0DP58 116 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 ZNF250P15622 560 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 MAKP20794 623 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 ACHEP22303 614 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 IGFBP5P24593 272 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 STOMP27105 288 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 CDAP32320 146 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 NUDT2P50583 147 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 PCBD1P61457 104 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 MAD2L1BPQ15013 274 aaPredicted RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 PABPC1L2AQ5JQF8 200 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 ELFN2Q5R3F8 820 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 FAM120AOSQ5T036 256 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 FAM27BQ5VT28 67 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 TMEM154Q6P9G4 183 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 SLC25A47Q6Q0C1 308 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 PAQR4Q8N4S7 273 aaPredicted RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 ARIH2OSQ8N7S6 290 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 LINC01356Q8N9X3 169 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 FAM162AQ96A26 154 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 NMD3Q96D46 503 aaKnown RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 SNX18Q96RF0 628 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 KCTD14Q9BQ13 255 aaPredicted RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 HINT3Q9NQE9 182 aaKnown RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 MYEF2Q9P2K5 600 aaKnown RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 RPS6KA6Q9UK32 745 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 FAM32AQ9Y421 112 aaKnown RBP15.23■□□□□ 0.03
TPM1-203ENST00000317516 SNX13Q9Y5W8 968 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 RTTNQ86VV8 2226 aa15.23■□□□□ 0.03
TPM1-203ENST00000317516 IGLV3-9A0A075B6K5 115 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 J3KTA2 159 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 FFAR1O14842 300 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 ATP8B1O43520 1251 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 GMNNO75496 209 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 HPXP02790 462 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 NAT2P11245 290 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 DRD4P21917 467 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 CCNOP22674 350 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 GPR6P46095 362 aaPredicted RBP15.22■□□□□ 0.03
TPM1-203ENST00000317516 GSK3BP49841 420 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 GDI2P50395 445 aaKnown RBP15.22■□□□□ 0.03
TPM1-203ENST00000317516 PCGF3Q3KNV8 242 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 C8orf82Q6P1X6 216 aaPredicted RBP15.22■□□□□ 0.03
TPM1-203ENST00000317516 MBOAT2Q6ZWT7 520 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 C1orf174Q8IYL3 243 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 ICA1LQ8NDH6 482 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 HSH2DQ96JZ2 352 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 ELAC2Q9BQ52 826 aaKnown RBP15.22■□□□□ 0.03
TPM1-203ENST00000317516 ZNF416Q9BWM5 594 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 OR51B6Q9H340 312 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 ANKRD19PQ9H560 264 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 MAN2C1Q9NTJ4 1040 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 UGT2A1Q9Y4X1 527 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 TIMM10BQ9Y5J6 103 aa15.22■□□□□ 0.03
TPM1-203ENST00000317516 TRAV27A0A087WT01 109 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 A0A087WUU8 490 aa15.21■□□□□ 0.03
TPM1-203ENST00000317516 C17orf100A8MU93 164 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms