RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MRPL13Q9BYD1 178 aaKnown RBP6.88□□□□□ -1.31
CDC42-201ENST00000315554 NDEL1Q9GZM8 345 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 FN3KQ9H479 309 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 NRIP3Q9NQ35 241 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 SLC17A5Q9NRA2 495 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 TBC1D23Q9NUY8 699 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 ZNF226Q9NYT6 803 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 NPAP1Q9NZP6 1156 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 BLOC1S6Q9UL45 172 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 SPEF1Q9Y4P9 236 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 SETXQ7Z333 2677 aaKnown RBP6.88□□□□□ -1.31
CDC42-201ENST00000315554 ADGRG4Q8IZF6 3080 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 UNC79Q9P2D8 2635 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
CDC42-201ENST00000315554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 A0A1W2PPL8 197 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 A0A1W2PPR1 153 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 A6NIZ1 184 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 VSTM5A8MXK1 200 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 DEFB108AA8MXU0 73 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 ZNF99A8MXY4 864 aaPredicted RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 H3BN98 237 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 RPL36A-HNRNPH2H7BZ11 118 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 M0R1B8 84 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 XKRYO14609 159 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 PLAUP00749 431 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HLA-HP01893 362 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 PPP3CBP16298 524 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HIST1H1CP16403 213 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 HOXB6P17509 224 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 SDHAP31040 664 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HOXC12P31275 282 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 CDKN2AP42771 156 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 PCYT1AP49585 367 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 RPS6KA3P51812 740 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 UBE2NP61088 152 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 RAP1BP61224 184 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 RAP1AP62834 184 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 TGFBR3Q03167 851 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 PIGFQ07326 219 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 ETFDHQ16134 617 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HIST3H3Q16695 136 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SLC36A3Q495N2 470 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 OR7E24Q6IFN5 339 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 ANKRD16Q6P6B7 361 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SHQ1Q6PI26 577 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 RASSF6Q6ZTQ3 369 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HDDC2Q7Z4H3 204 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SDR9C7Q8NEX9 313 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 OR52L1Q8NGH7 329 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 FGFBP3Q8TAT2 258 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 HSD17B8Q92506 261 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 NRGNQ92686 78 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 TRIM63Q969Q1 353 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 NMD3Q96D46 503 aaKnown RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 MUCL1Q96DR8 90 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 PLPPR2Q96GM1 343 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 TSSK2Q96PF2 358 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 GPX7Q96SL4 187 aaPredicted RBP6.87□□□□□ -1.31
CDC42-201ENST00000315554 NMNAT3Q96T66 252 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 FOXB1Q99853 325 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SH3GL3Q99963 347 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SEC61A2Q9H9S3 476 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 NOX3Q9HBY0 568 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 S100A14Q9HCY8 104 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 KIF17Q9P2E2 1029 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 REV1Q9UBZ9 1251 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SLC25A15Q9Y619 301 aa6.87□□□□□ -1.31
CDC42-201ENST00000315554 SLC22A23A1A5C7 686 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 PRSS37A4D1T9 235 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 NPIPB13A6NJU9 1138 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 NPIPB4C9JG80 1138 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 G3V2T6 193 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 SLC16A7O60669 478 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 CTAG2O75638 210 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 GPANK1O95872 356 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 HRGP04196 525 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 SCG5P05408 212 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 CELA3BP08861 270 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 CD79AP11912 226 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 FCGR1AP12314 374 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 RPS2P15880 293 aaKnown RBP6.86□□□□□ -1.31
CDC42-201ENST00000315554 CTLA4P16410 223 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 GSTM3P21266 225 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 LOXP28300 417 aaPredicted RBP6.86□□□□□ -1.31
CDC42-201ENST00000315554 NOS3P29474 1203 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 SSTR2P30874 369 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 CENPAP49450 140 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 DAPP51397 102 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 ZNF84P51523 738 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 ARHGDIAP52565 204 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDC42-201ENST00000315554 SPOCK1Q08629 439 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 NPRL3Q12980 569 aa6.86□□□□□ -1.31
CDC42-201ENST00000315554 DAZAP2Q15038 168 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms