RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CYB5R1Q9UHQ9 305 aa12.16□□□□□ -0.46
SKA3-202ENST00000314759 CACNA1IQ9P0X4 2223 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 REV3LO60673 3130 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 C2orf74A8MZ97 194 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 OIP5O43482 229 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 RAD1O60671 282 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 PMS2P2O95744 297 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 ASAH2BP0C7U1 165 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 UBBP0CG47 229 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 UBCP0CG48 685 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 RAB13P51153 203 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 PSMD4P55036 377 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 RPS27AP62979 156 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 UBA52P62987 128 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 EGR3Q06889 387 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 RASGEF1BQ0VAM2 473 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 JMJD6Q6NYC1 403 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 TMED4Q7Z7H5 227 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 C12orf45Q8N5I9 185 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 OR1S2Q8NGQ3 325 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 C16orf52Q8NHV5 167 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 LIPHQ8WWY8 451 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 ASB13Q8WXK3 278 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 WDR92Q96MX6 357 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 TSPAN32Q96QS1 320 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 ATG5Q9H1Y0 275 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 HRASLS2Q9NWW9 162 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 COL4A2P08572 1712 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 LOC100289279A0A1B0GTE1 492 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 TMEM82A0PJX8 343 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 LINC01553A4QN01 128 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 CDC40O60508 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
SKA3-202ENST00000314759 SLC25A12O75746 678 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 TXNDC12O95881 172 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 GLAP06280 429 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 MELTFP08582 738 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 RAB11BQ15907 218 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 KLHL26Q53HC5 615 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 HAGHLQ6PII5 290 aaPredicted RBP12.15□□□□□ -0.46
SKA3-202ENST00000314759 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 BMFQ96LC9 184 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 CCDC3Q9BQI4 270 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 FAM60AQ9NP50 221 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 OBP2AQ9NY56 170 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 CTSFQ9UBX1 484 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 KCNG2Q9UJ96 466 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
SKA3-202ENST00000314759 K7EQS6 105 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 SLC17A2O00624 439 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 CD226Q15762 336 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 ZNF528Q3MIS6 628 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 WBP2NLQ6ICG8 309 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 CBLN3Q6UW01 205 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 BEST3Q8N1M1 668 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 GALNT16Q8N428 558 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PLPP7Q8NBV4 271 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PPP1R14AQ96A00 147 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 KTI12Q96EK9 354 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 CMSS1Q9BQ75 279 aaKnown RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 FAM117AQ9C073 453 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 SYT4Q9H2B2 425 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 F5P12259 2224 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 A0A0J9YY10 115 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 OR5H14A6NHG9 310 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PRSS44E7EML9 344 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 M0QYG6 137 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 RAB3DO95716 219 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PNMTP11086 282 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 GPR3P46089 330 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 KCNJ3P48549 501 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 CCR4P51679 360 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 NR0B2Q15466 257 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PM20D2Q8IYS1 436 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 ZFP82Q8N141 532 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 STEAP2Q8NFT2 490 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 INTS14Q96SY0 518 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 GAL3ST1Q99999 423 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 TINAGL1Q9GZM7 467 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 GDE1Q9NZC3 331 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 FBXO4Q9UKT5 387 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 A0A0A6YYC8 382 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 TMEM218A2RU14 115 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 I3L1I5 382 aaPredicted RBP12.14□□□□□ -0.47
SKA3-202ENST00000314759 KCNAB3O43448 404 aa12.14□□□□□ -0.47
SKA3-202ENST00000314759 CD8AP01732 235 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms