RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SP9P0CG40 484 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 NPSR1Q6W5P4 371 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 MOV10Q9HCE1 1003 aaKnown RBP12.38□□□□□ -0.43
DDX54-202ENST00000314045 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 YES1P07947 543 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 BDKRB2P30411 391 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 RBMXP38159 391 aaKnown RBP12.38□□□□□ -0.43
DDX54-202ENST00000314045 TPBGQ13641 420 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 PLCXD3Q63HM9 321 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 ZNF585AQ6P3V2 769 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 COX15Q7KZN9 410 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 ZNF611Q8N823 705 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 AKAP1Q92667 903 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX54-202ENST00000314045 NINJ1Q92982 152 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 ARL5BQ96KC2 179 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 OPALINQ96PE5 141 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 CPNE5Q9HCH3 593 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 MKRN2OSH3BPM6 223 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 FZD7O75084 574 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 DBHP09172 617 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 SMIM10L1P0DMW3 83 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 LAP3P28838 519 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 ATP1B3P54709 279 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 MRPS10P82664 201 aaKnown RBP12.38□□□□□ -0.43
DDX54-202ENST00000314045 NDUFA5Q16718 116 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 NKPD1Q17RQ9 610 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
DDX54-202ENST00000314045 SMIM10Q96HG1 83 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 PAPOLGQ9BWT3 736 aaKnown RBP12.38□□□□□ -0.43
DDX54-202ENST00000314045 OR10A4Q9H209 315 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 SIAEQ9HAT2 523 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 PLEKHJ1Q9NW61 149 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 FLRT3Q9NZU0 649 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 KCNIP3Q9Y2W7 256 aa12.38□□□□□ -0.43
DDX54-202ENST00000314045 FXYD6-FXYD2A0A087WZ82 144 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 TNFSF11O14788 317 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 SGCEO43556 437 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 RAB3DO95716 219 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 POU3F3P20264 500 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 FXNQ16595 210 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ISXQ2M1V0 245 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 B3GNTL1Q67FW5 361 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 IL17RDQ8NFM7 739 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 LGALS14Q8TCE9 139 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 SLAMF6Q96DU3 332 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 FAM173AQ9BQD7 235 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 FXYD6Q9H0Q3 95 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 EXOSC3Q9NQT5 275 aaKnown RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 KCNG2Q9UJ96 466 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 MEIS3P1A6NDR6 274 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 MKXQ8IYA7 352 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ZNF679Q8IYX0 411 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 OR8D4Q8NGM9 314 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 SARAFQ96BY9 339 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 CPEP16870 476 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ZNF16P17020 682 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 SRMP19623 302 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 APEX1P27695 318 aaKnown RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 MTCP1P56278 107 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ARSKQ6UWY0 536 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 CSNK2A3Q8NEV1 391 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ROBO4Q8WZ75 1007 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 MFRPQ9BY79 579 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 NDUFB11Q9NX14 153 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ZNF35P13682 527 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 SOX18P35713 384 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 TOMM34Q15785 309 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 CCDC58Q4VC31 144 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 OR2V1Q8NHB1 315 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 OIT3Q8WWZ8 545 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 MOGAT1Q96PD6 335 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 PAQR5Q9NXK6 330 aaPredicted RBP12.37□□□□□ -0.43
DDX54-202ENST00000314045 GSKIPQ9P0R6 139 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 PCDHGA3Q9Y5H0 932 aa12.37□□□□□ -0.43
DDX54-202ENST00000314045 ZNF254O75437 659 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 NTN1O95631 604 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 IL7P13232 177 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 HTR2CP28335 458 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX54-202ENST00000314045 IL10RAQ13651 578 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 OR5H2Q8NGV7 314 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 ISYNA1Q9NPH2 558 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 SLC5A6Q9Y289 635 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 A3GALT2U3KPV4 340 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 MN1Q10571 1320 aaPredicted RBP12.36□□□□□ -0.43
DDX54-202ENST00000314045 CENPVL1A0A0U1RR11 272 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 DHHO43323 396 aa12.36□□□□□ -0.43
DDX54-202ENST00000314045 FCGR2AP12318 317 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms