RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DPP4P27487 766 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 DCDP81605 110 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 GGTLC2Q14390 218 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 GK2Q14410 553 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 HLXQ14774 488 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 C1orf189Q5VU69 101 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SYT9Q86SS6 491 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 IZUMO1Q8IYV9 350 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 ARMC10Q8N2F6 343 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR2L13Q8N349 312 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 POMGNT2Q8NAT1 580 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SAP25Q8TEE9 199 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 C15orf40Q8WUR7 153 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 THEM6Q8WUY1 208 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 CHIAQ9BZP6 476 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF350Q9GZX5 532 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF768Q9H5H4 540 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SERTAD3Q9UJW9 196 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 NPIPA5A0A0B4J1W7 369 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 NPIPA7E9PJI5 369 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 M0R296 226 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR10H2O60403 315 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 HIST1H2ABP04908 130 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 RAB40ALP0C0E4 278 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 NPIPA8P0DM63 369 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 CLUP10909 449 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 HPGDP15428 266 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 PTNP21246 168 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 S100A11P31949 105 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 P2RY4P51582 365 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 RAB38P57729 211 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 DEFA5Q01523 94 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 DUSP5Q16690 384 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 TP53I3Q53FA7 332 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 TRIM61Q5EBN2 209 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 EXOSC6Q5RKV6 272 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 TCEAL6Q6IPX3 200 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 MTFR2Q6P444 385 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 ARHGAP11AQ6P4F7 1023 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 APOOLQ6UXV4 268 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF574Q6ZN55 896 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 HIST3H2AQ7L7L0 130 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 PLXDC1Q8IUK5 500 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR1L3Q8NH93 324 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 RPS4Y2Q8TD47 263 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 RAB40AQ8WXH6 277 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 HIST1H2ACQ93077 130 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 SLC25A38Q96DW6 304 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 C14orf105Q9NVL8 296 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 MRPL15Q9P015 296 aaKnown RBP9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 MIOXQ9UGB7 285 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 GPR160Q9UJ42 338 aa9.37□□□□□ -0.91
APOBEC3F-201ENST00000308521 CENPVL1A0A0U1RR11 272 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 A0A1W2PPK0 400 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 IFITM5A6NNB3 132 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 SUSD5O60279 629 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 KHDRBS3O75525 346 aaKnown RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 ATG12O94817 140 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 NID1P14543 1247 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 SRMP19623 302 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 SLC6A6P31641 620 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PTH2RP49190 550 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 SEC61A1P61619 476 aaKnown RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 HSD11B2P80365 405 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 ECH1Q13011 328 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 IL10RAQ13651 578 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 NNATQ16517 81 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PRICKLE4Q2TBC4 344 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF613Q6PF04 617 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PMM1Q92871 262 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 CPNE4Q96A23 557 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 ALX4Q9H161 411 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 CA10Q9NS85 328 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 ANKRD10Q9NXR5 420 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 FOXJ3Q9UPW0 622 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 EP300Q09472 2414 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 LY6G6EA0A0G2JKS1 128 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 TRBV2A0A0J9YWF9 115 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 TO15178 435 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 RGS11O94810 467 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 NDUFB6O95139 128 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PPP1R3DO95685 299 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 GABRA1P14867 456 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PAX6P26367 422 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 CAPZA1P52907 286 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 RAB5BP61020 215 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 MRPL2Q5T653 305 aaKnown RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 C3orf33Q6P1S2 294 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 FIGNL1Q6PIW4 674 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 SMAP2Q8WU79 429 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 PNPLA2Q96AD5 504 aa9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 S100A16Q96FQ6 103 aaKnown RBP9.36□□□□□ -0.91
APOBEC3F-201ENST00000308521 RBM18Q96H35 190 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms