RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 HIST1H1BP16401 226 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 MAOAP21397 527 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ALDH3B1P43353 468 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SOX2P48431 317 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 PNLIPRP1P54315 467 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 TECPR1Q7Z6L1 1165 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 LRRTM4Q86VH4 590 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SPICQ8N5J4 248 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 OR5W2Q8NH69 310 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 HSD17B8Q92506 261 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 RGP1Q92546 391 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 NCOR1P1Q9H4R4 102 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 DKKL1Q9UK85 242 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SPTBN5Q9NRC6 3674 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 PRAMEF27A3QJZ7 478 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 KLF8O95600 359 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 CNOT4O95628 575 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 EDNRAP25101 427 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 GSK3AP49840 483 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 STXBP1P61764 594 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SNRPGP62308 76 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 NKPD1Q17RQ9 610 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 FAM71CQ8NEG0 241 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 OR52L1Q8NGH7 329 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 AP1S3Q96PC3 154 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SARGQ9BW04 601 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 PLA2G12AQ9BZM1 189 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ZNF700Q9H0M5 742 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 TMEM38AQ9H6F2 299 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 DOK5Q9P104 306 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SERTM1A2A2V5 107 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 A6NNC1 897 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 FAAHO00519 579 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 DVL2O14641 736 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 KCNAB3O43448 404 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 TBX6O95947 436 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ACTL6AO96019 429 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 RFX3P48380 749 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 MRPS21P82921 87 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 RASGEF1BQ0VAM2 473 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 PODNL1Q6PEZ8 512 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 FRRS1Q6ZNA5 592 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 RNF113BQ8IZP6 322 aaKnown RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 MUC20Q8N307 709 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 MAFAQ8NHW3 353 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 NKD1Q969G9 470 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ZNF607Q96SK3 696 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ELF4Q99607 663 aaPredicted RBP9.57□□□□□ -0.88
MSRB3-201ENST00000308259 NRIP2Q9BQI9 281 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 SMIM3Q9BZL3 60 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 ZDHHC5Q9C0B5 715 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 OR14J1Q9UGF5 321 aa9.57□□□□□ -0.88
MSRB3-201ENST00000308259 UMAD1C9J7I0 102 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR2F2O95006 317 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 HLA-AP01891 365 aaKnown RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 AMY2AP04746 511 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 LAMP2P13473 410 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 BMI1P35226 326 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 IDH3GP51553 393 aaPredicted RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 UBE2KP61086 200 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR2F1Q13607 317 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ZNF627Q7L945 461 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 PARGQ86W56 976 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 C17orf64Q86WR6 236 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 BAP18Q8IXM2 172 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 DYRK2Q92630 601 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 MARS2Q96GW9 593 aaKnown RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 MRGPRX3Q96LB0 322 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 EFCAB11Q9BUY7 163 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 MYNNQ9NPC7 610 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CNIH4Q9P003 139 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 SLC23A2Q9UGH3 650 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CYP8B1Q9UNU6 501 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 TP53TG5Q9Y2B4 290 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 NTNG1Q9Y2I2 539 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ZNF320A2RRD8 509 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 HMGN4O00479 90 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CYB5BO43169 146 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 TMPRSS11DO60235 418 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CALCRP30988 508 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 FGF9P31371 208 aaPredicted RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 MAPK14Q16539 360 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 PRAMEF20Q5VT98 475 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 YOD1Q5VVQ6 348 aaPredicted RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 UNQ6494/PRO21346Q6UXR6 183 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ACOT7LQ6ZUV0 252 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR2L3Q8NG85 312 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 SYNPRQ8TBG9 265 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ELSPBP1Q96BH3 223 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 TMEM129A0AVI4 362 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR5H15A6NDH6 313 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR5H1A6NKK0 313 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 TMEM210A6NLX4 147 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ACOT7O00154 380 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 MUC1P15941 1255 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms