RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TOP3AQ13472 1001 aaPredicted RBP17.5■□□□□ 0.39
RER1-201ENST00000306256 LAPTM4AQ15012 233 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 MMEL1Q495T6 779 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 LRRC23Q53EV4 343 aaPredicted RBP17.5■□□□□ 0.39
RER1-201ENST00000306256 HDDC2Q7Z4H3 204 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 NSMAFQ92636 917 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 NMD3Q96D46 503 aaKnown RBP17.5■□□□□ 0.39
RER1-201ENST00000306256 SH3GL1Q99961 368 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 BCL2L14Q9BZR8 327 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 OCEL1Q9H607 264 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 METRNQ9UJH8 293 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 DYSFO75923 2080 aa17.5■□□□□ 0.39
RER1-201ENST00000306256 CENPBD1B2RD01 187 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 ZNF32P17041 273 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 RAD52P43351 418 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 MRPS34P82930 218 aaKnown RBP17.49■□□□□ 0.39
RER1-201ENST00000306256 CD47Q08722 323 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 KLF10Q13118 480 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 CYBRD1Q53TN4 286 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 SPATA46Q5T0L3 261 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 OR1J1Q8NGS3 322 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 OR51F2Q8NH61 342 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 C10orf82Q8WW14 230 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 NABP1Q96AH0 204 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 ZNF583Q96ND8 569 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 LRRC37BQ96QE4 947 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 POLR2J2Q9GZM3 115 aaKnown RBP17.49■□□□□ 0.39
RER1-201ENST00000306256 POLR2J3Q9H1A7 115 aaKnown RBP17.49■□□□□ 0.39
RER1-201ENST00000306256 CCNB1IP1Q9NPC3 277 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 SLCO1C1Q9NYB5 712 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 MED31Q9Y3C7 131 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 ANK2Q01484 3957 aa17.49■□□□□ 0.39
RER1-201ENST00000306256 MGRN1O60291 552 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 TSPAN19P0C672 248 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 STOMP27105 288 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 MVKQ03426 396 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 SGCAQ16586 387 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 PCGF3Q3KNV8 242 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 ERICH5Q6P6B1 374 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 THSD4Q6ZMP0 1018 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 MEX3DQ86XN8 651 aaKnown RBP17.48■□□□□ 0.39
RER1-201ENST00000306256 ZNF101Q8IZC7 436 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 CLDN22Q8N7P3 220 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.48■□□□□ 0.39
RER1-201ENST00000306256 AKR7LQ8NHP1 331 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 LIPHQ8WWY8 451 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 TPD52L3Q96J77 140 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 KCNN2Q9H2S1 579 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 VIPAS39Q9H9C1 493 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 SIAEQ9HAT2 523 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 STX18Q9P2W9 335 aaKnown RBP17.48■□□□□ 0.39
RER1-201ENST00000306256 GRIP1Q9Y3R0 1128 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 CACNG2Q9Y698 323 aa17.48■□□□□ 0.39
RER1-201ENST00000306256 TPD52L2O43399 206 aaKnown RBP17.47■□□□□ 0.39
RER1-201ENST00000306256 VENTXO95231 258 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 IGF2P01344 180 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 IFNA14P01570 189 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 DRD4P21917 467 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 FUT4P22083 530 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 WNT5AP41221 380 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 ERVK-25P63136 954 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 TSTQ16762 297 aaKnown RBP17.47■□□□□ 0.39
RER1-201ENST00000306256 COQ5Q5HYK3 327 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 TMEM255AQ5JRV8 349 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 SHQ1Q6PI26 577 aaKnown RBP17.47■□□□□ 0.39
RER1-201ENST00000306256 USP51Q70EK9 711 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 IGFN1Q86VF2 1251 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 TXNIPQ9H3M7 391 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 SAR1AQ9NR31 198 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 FGFR1OP2Q9NVK5 253 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 NKIRAS2Q9NYR9 191 aa17.47■□□□□ 0.39
RER1-201ENST00000306256 LOC100509620A0A075B734 347 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 IGHV1-69-2A0A0G2JMI3 117 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 C5orf49A4QMS7 147 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 BBIP1A8MTZ0 92 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 FAM220BPB1ANY3 271 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 RGS9O75916 674 aaPredicted RBP17.46■□□□□ 0.39
RER1-201ENST00000306256 THRBP10828 461 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 IFI30P13284 250 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 MPV17P39210 176 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 CRYBB2P43320 205 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 ALG10Q5BKT4 473 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 SLC25A47Q6Q0C1 308 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 MICU2Q8IYU8 434 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 POM121L2Q96KW2 1035 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 ZNF665Q9H7R5 613 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 SMURF2Q9HAU4 748 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 GMPR2Q9P2T1 348 aaKnown RBP17.46■□□□□ 0.39
RER1-201ENST00000306256 A4GNTQ9UNA3 340 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 HIF3AQ9Y2N7 669 aa17.46■□□□□ 0.39
RER1-201ENST00000306256 LOC100653049A0A140TA62 436 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 NPIPB13A6NJU9 1138 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 NPIPB4C9JG80 1138 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 SASH3O75995 380 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 KRT34O76011 436 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 IGHV3-13P01766 116 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 TROVE2P10155 538 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■□□□□ 10.5
RER1-201ENST00000306256 KDELR2P33947 212 aa17.45■□□□□ 0.38
RER1-201ENST00000306256 YAP1P46937 504 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms