RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 POMT2Q9UKY4 750 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 GFERP55789 205 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 CD276Q5ZPR3 534 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 PPP1R35Q8TAP8 253 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 ABHD5Q8WTS1 349 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 PCNPQ8WW12 178 aaKnown RBP14.94□□□□□ -0.02
BRD3-201ENST00000303407 ARPC5LQ9BPX5 153 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 HRH4Q9H3N8 390 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 RPS10P5Q9NQ39 176 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 OR14J1Q9UGF5 321 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 NUP205Q92621 2012 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 A0A0B4J2A0 478 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 DSCR3O14972 297 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 C12orf73Q69YU5 71 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 OR5H6Q8NGV6 325 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 SLC7A6Q92536 515 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 TWSG1Q9GZX9 223 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 SHPKQ9UHJ6 478 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 MED16Q9Y2X0 877 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 GABARAPH6UMI1 98 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 IL32P24001 234 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 CHATP28329 748 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 YBX1P67809 324 aaKnown RBP14.94□□□□□ -0.02
BRD3-201ENST00000303407 BCL2A1Q16548 175 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 ZNF793Q6ZN11 406 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 LINC00696Q6ZRV3 163 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 OR52I2Q8NH67 350 aa14.94□□□□□ -0.02
BRD3-201ENST00000303407 MED6O75586 246 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 SLC2A1P11166 492 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 ETV6P41212 452 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 C11orf91Q3C1V1 193 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 CCDC163A0A0D9SF12 145 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 ANGPTL5Q86XS5 388 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 OR11A1Q9GZK7 315 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
BRD3-201ENST00000303407 RAB9BQ9NP90 201 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 WSB2Q9NYS7 404 aaPredicted RBP14.93□□□□□ -0.02
BRD3-201ENST00000303407 SMCHD1A6NHR9 2005 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 LOC107986453A0A1B0GWG9 222 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 IDSB3KWA1 339 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 SRFP11831 508 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 APEHP13798 732 aaKnown RBP14.93□□□□□ -0.02
BRD3-201ENST00000303407 XAF1Q6GPH4 301 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 SYT9Q86SS6 491 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 GJC3Q8NFK1 279 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 OR51S1Q8NGJ8 323 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 FRG2CA6NGY1 282 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 FADS1O60427 444 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 S100A12P80511 92 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 SMAD4Q13485 552 aaKnown RBP14.93□□□□□ -0.02
BRD3-201ENST00000303407 SLC25A43Q8WUT9 341 aaPredicted RBP14.93□□□□□ -0.02
BRD3-201ENST00000303407 SLAMF9Q96A28 289 aa14.93□□□□□ -0.02
BRD3-201ENST00000303407 PMS2P2O95744 297 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 DYRK1AQ13627 763 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 SYS1Q8N2H4 156 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 MED18Q9BUE0 208 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 EDARQ9UNE0 448 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 K7EPK0 472 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 DOC2BQ14184 412 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 FAM71E2Q8N5Q1 922 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 ARIH2OSQ8N7S6 290 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 AMER3Q8N944 861 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 S100PBPQ96BU1 408 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 SLC19A3Q9BZV2 496 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 LPLP06858 475 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 CD53P19397 219 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 TCN2P20062 427 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 RPP30P78346 268 aaKnown RBP14.92□□□□□ -0.02
BRD3-201ENST00000303407 HTRA4P83105 476 aaPredicted RBP14.92□□□□□ -0.02
BRD3-201ENST00000303407 EGR3Q06889 387 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 ZNF813Q6ZN06 617 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 STT3BQ8TCJ2 826 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 SMIM19Q96E16 107 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 WDR34Q96EX3 536 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 TSSK2Q96PF2 358 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 PADI1Q9ULC6 663 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 A0A0B4J203 849 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 ZNF814B7Z6K7 855 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 MCRIP1C9JLW8 97 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 SIX6O95475 246 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 TRAPPC2P0DI81 140 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 TRAPPC2BP0DI82 140 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 POU3F3P20264 500 aaPredicted RBP14.92□□□□□ -0.02
BRD3-201ENST00000303407 PLA2G7Q13093 441 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 COMTD1Q86VU5 262 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 GCDHQ92947 438 aaPredicted RBP14.92□□□□□ -0.02
BRD3-201ENST00000303407 ATF6BQ99941 703 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 LRRC61Q9BV99 259 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 WWTR1Q9GZV5 400 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 PLEKHA3Q9HB20 300 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 CSF3P09919 207 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 CPT2P23786 658 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 EIF2S3LQ2VIR3 472 aaKnown RBP14.92□□□□□ -0.02
BRD3-201ENST00000303407 S1PR5Q9H228 398 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 RGPD4Q7Z3J3 1758 aa14.92□□□□□ -0.02
BRD3-201ENST00000303407 ZNF587BE7ETH6 402 aa14.91□□□□□ -0.02
BRD3-201ENST00000303407 PRAMEF4O60810 478 aa14.91□□□□□ -0.02
BRD3-201ENST00000303407 ZNF529Q6P280 563 aa14.91□□□□□ -0.02
BRD3-201ENST00000303407 KIRREL2Q6UWL6 708 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms