RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CTSCP53634 463 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CTU2Q2VPK5 515 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 EDAQ92838 391 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 YIPF6Q96EC8 236 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM235A6NFC5 223 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 H0YGG7 62 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF865P0CJ78 1059 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 GDF1P27539 372 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZBTB37Q5TC79 503 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SIGLECL1Q8N7X8 197 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 M1APQ8TC57 530 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SLC35B4Q969S0 331 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 BSCL2Q96G97 398 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 LCORQ96JN0 433 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CIB3Q96Q77 187 aaPredicted RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 PAAF1Q9BRP4 392 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TRAV1-2A0A0B4J238 106 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OR5H14A6NHG9 310 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 FAM227AF5H4B4 570 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 EIF4E2O60573 245 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CBX7O95931 251 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 LGI1O95970 557 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 TPOP07202 933 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SHC1P29353 583 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 CLINT1Q14677 625 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 OR52W1Q6IF63 320 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 FAM111BQ6SJ93 734 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF561Q8N587 486 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 INTS12Q96CB8 462 aaKnown RBP7.04□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF251Q9BRH9 671 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 SPNS1Q9H2V7 528 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 DUSP22Q9NRW4 184 aa7.04□□□□□ -1.28
SF3B3-201ENST00000302516 MEIS3P2A8K0S8 358 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 BCL2L11O43521 198 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 APOBEC1P41238 236 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 RNF4P78317 190 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 MFAP5Q13361 173 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 DDOQ99489 341 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 C20orf27Q9GZN8 174 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 SLC17A5Q9NRA2 495 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GNG12Q9UBI6 72 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 AK3Q9UIJ7 227 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 PLXNB2O15031 1838 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR7C1O76099 320 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 SIX6O95475 246 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 CD46P15529 392 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GABRB1P18505 474 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 FAM71E1Q6IPT2 247 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ANKRD16Q6P6B7 361 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 NHLRC2Q8NBF2 726 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR51S1Q8NGJ8 323 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TAAR2Q9P1P5 351 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 SLC5A10A0PJK1 596 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 A6NIN4 97 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ST8SIA3O43173 380 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 UBE2MP61081 183 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 MEX3DQ86XN8 651 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 UCN3Q969E3 161 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR2A14Q96R47 310 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GLIPR2Q9H4G4 154 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 CXorf36Q9H7Y0 433 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF629Q9UEG4 869 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 RNF24Q9Y225 148 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ARID1AO14497 2285 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 A0A0A6YYC8 382 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ZAR1LA6NP61 321 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 I3L1I5 382 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TIMP1P01033 207 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 JAG1P78504 1218 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 HOXC5Q00444 222 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ZNF239Q16600 458 aaKnown RBP7.03□□□□□ -1.28
SF3B3-201ENST00000302516 DEFB110Q30KQ9 67 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 DYNC2LI1Q8TCX1 351 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TMEM255BQ8WV15 326 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 SOX7Q9BT81 388 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GAB2Q9UQC2 676 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 CKAP5Q14008 2032 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 A0A1B0GWA3 101 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 PRAMEF4O60810 478 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 WNT11O96014 354 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 MFSD12Q6NUT3 480 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ESPNLQ6ZVH7 1005 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GRINAQ7Z429 371 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 PRR22Q8IZ63 422 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR1M1Q8NGA1 313 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 GPX8Q8TED1 209 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TM4SF18Q96CE8 201 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 KIR3DX1Q9H7L2 352 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 ACAD8Q9UKU7 415 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 NPIPA5A0A0B4J1W7 369 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 PSMB6P28072 239 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 TEX19Q8NA77 164 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 OR13C9Q8NGT0 318 aa7.03□□□□□ -1.28
SF3B3-201ENST00000302516 SFT2D1Q8WV19 159 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms