RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 PCBP3P57721 371 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 TAGLNQ01995 201 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 EIF2S3LQ2VIR3 472 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 TMEM240Q5SV17 173 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 OR13C5Q8NGS8 318 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 PPP1R35Q8TAP8 253 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 NMNAT2Q9BZQ4 307 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 NRSN2Q9GZP1 204 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 CCL27Q9Y4X3 112 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 ADAMTSL1Q8N6G6 1762 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 PRICKLE3O43900 615 aaPredicted RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 OR7C1O76099 320 aaPredicted RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 ICAM2P13598 275 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 CD27P26842 260 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 GRB2P62993 217 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 SRPXP78539 464 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 FBXW12Q6X9E4 464 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 SMIM4Q8WVI0 70 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 MRPL38Q96DV4 380 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 SNRNP70P08621 437 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 FKBP2P26885 142 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 LRRC18Q8N456 261 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 SLC25A43Q8WUT9 341 aaPredicted RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 ZNF346Q9UL40 294 aaKnown RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 MMP15P51511 669 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 SSX1Q16384 188 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 YOD1Q5VVQ6 348 aaPredicted RBP17.66■□□□□ 0.42
TSR1-201ENST00000301364 GLIPR1L1Q6UWM5 242 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 C16orf52Q8NHV5 167 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 MARC2Q969Z3 335 aa17.66■□□□□ 0.42
TSR1-201ENST00000301364 ST6GAL1P15907 406 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 PCBP4P57723 403 aaKnown RBP17.65■□□□□ 0.42
TSR1-201ENST00000301364 ACKR1Q16570 336 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 SYT9Q86SS6 491 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 RPL18Q07020 188 aaKnown RBP17.65■□□□□ 0.42
TSR1-201ENST00000301364 ZNF684Q5T5D7 378 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 AGBL5Q8NDL9 886 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 APH1BQ8WW43 257 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 UCN3Q969E3 161 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 LOC107986453A0A1B0GWG9 222 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 NPIPB8E9PQR5 432 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 H0YIG0 161 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 WISP3O95389 354 aaPredicted RBP17.65■□□□□ 0.42
TSR1-201ENST00000301364 IFNA4P05014 189 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 TGFBR3Q03167 851 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 IL10RAQ13651 578 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 ZNF674Q2M3X9 581 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 AAED1Q7RTV5 226 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 RDH10Q8IZV5 341 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 PRSS35Q8N3Z0 413 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 ZNF680Q8NEM1 530 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 OR5D18Q8NGL1 313 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 CHRNA9Q9UGM1 479 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 PCDHGA1Q9Y5H4 931 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 GPR171O14626 319 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 PPM1DO15297 605 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 DOK2O60496 412 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 OR2F2O95006 317 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 OR2F1Q13607 317 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 STAC2Q6ZMT1 411 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 TMPRSS11FQ6ZWK6 438 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 SIRT6Q8N6T7 355 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 GJC3Q8NFK1 279 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 PIGMQ9H3S5 423 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 SDHAF2Q9NX18 166 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 KIAA1217Q5T5P2 1943 aa17.65■□□□□ 0.42
TSR1-201ENST00000301364 FITM1A5D6W6 292 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 DPP4P27487 766 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 NKX6-1P78426 367 aaPredicted RBP17.64■□□□□ 0.41
TSR1-201ENST00000301364 LILRA6Q6PI73 481 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 GABRG1Q8N1C3 465 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 PATE1Q8WXA2 126 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 CMTM3Q96MX0 182 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 MMP17Q9ULZ9 603 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 FBXO7Q9Y3I1 522 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 KCNE3Q9Y6H6 103 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 ZNF44P15621 663 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 LIX1LQ8IVB5 337 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 OR4Q3Q8NH05 313 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 MRPL33O75394 65 aaKnown RBP17.64■□□□□ 0.41
TSR1-201ENST00000301364 PMP2P02689 132 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 PRAMEF20Q5VT98 475 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 RAB9BQ9NP90 201 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 TAS2R4Q9NYW5 299 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 BOKQ9UMX3 212 aaPredicted RBP17.64■□□□□ 0.41
TSR1-201ENST00000301364 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 PRAMEF25A6NGN4 478 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 MAGEB4O15481 346 aaPredicted RBP17.64■□□□□ 0.41
TSR1-201ENST00000301364 GPATCH2Q9NW75 528 aa17.64■□□□□ 0.41
TSR1-201ENST00000301364 RAD52P43351 418 aa17.63■□□□□ 0.41
TSR1-201ENST00000301364 IDH3GP51553 393 aaPredicted RBP17.63■□□□□ 0.41
TSR1-201ENST00000301364 RPS18P62269 152 aaKnown RBP17.63■□□□□ 0.41
TSR1-201ENST00000301364 FAM53BQ14153 422 aa17.63■□□□□ 0.41
TSR1-201ENST00000301364 IAH1Q2TAA2 248 aaPredicted RBP17.63■□□□□ 0.41
TSR1-201ENST00000301364 AADACL4Q5VUY2 407 aa17.63■□□□□ 0.41
TSR1-201ENST00000301364 NKAIN2Q5VXU1 208 aa17.63■□□□□ 0.41
TSR1-201ENST00000301364 CCL4L1Q8NHW4 92 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms