RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ATF1P18846 271 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 RAB3BP20337 219 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 SLC6A8P48029 635 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 CBFBQ13951 182 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 MELKQ14680 651 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 OPCMLQ14982 345 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 SLC6A19Q695T7 634 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 Q6ZTK2 550 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 EXD3Q8N9H8 876 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 OR6M1Q8NGM8 313 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 GCDHQ92947 438 aaPredicted RBP19.78■□□□□ 0.76
TPM4-201ENST00000300933 SFXN2Q96NB2 322 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 AMELYQ99218 206 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 NOX4Q9NPH5 578 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 IKZF2Q9UKS7 526 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 SRPK3Q9UPE1 567 aa19.78■□□□□ 0.76
TPM4-201ENST00000300933 ALOX12BO75342 701 aa19.77■□□□□ 0.76
TPM4-201ENST00000300933 HLA-DQA2P01906 255 aa19.77■□□□□ 0.76
TPM4-201ENST00000300933 POU3F2P20265 443 aaPredicted RBP19.77■□□□□ 0.76
TPM4-201ENST00000300933 GALP22466 123 aa19.77■□□□□ 0.76
TPM4-201ENST00000300933 THEM6Q8WUY1 208 aa19.77■□□□□ 0.76
TPM4-201ENST00000300933 RNF166Q96A37 237 aaPredicted RBP19.77■□□□□ 0.76
TPM4-201ENST00000300933 NUP62P37198 522 aaPredicted RBP19.77■□□□□ 0.75
TPM4-201ENST00000300933 SOX2P48431 317 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 P2RX1P51575 399 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 EMP2P54851 167 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 ACY1Q03154 408 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 SLC35D2Q76EJ3 337 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 BTN2A1Q7KYR7 527 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 ZNF433Q8N7K0 673 aaPredicted RBP19.77■□□□□ 0.75
TPM4-201ENST00000300933 LIPHQ8WWY8 451 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 ARL5BQ96KC2 179 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 DUSP23Q9BVJ7 150 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 C20orf85Q9H1P6 137 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 TAS2R10Q9NYW0 307 aa19.77■□□□□ 0.75
TPM4-201ENST00000300933 TRABD2BA6NFA1 517 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 TOR1AO14656 332 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 ADAM10O14672 748 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 PIN1P1O15428 100 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 GATBO75879 557 aaKnown RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 DCDP81605 110 aaKnown RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 SYS1Q8N2H4 156 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 NFAM1Q8NET5 270 aaPredicted RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 METTL21AQ8WXB1 218 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 KCTD12Q96CX2 325 aaKnown RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 WBP1Q96G27 269 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 DERL3Q96Q80 235 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 MRM2Q9UI43 246 aaKnown RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 RALGAPA1Q6GYQ0 2036 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 TRAV36DV7A0A075B6V5 113 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 TMEM200CA6NKL6 621 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 RAD1O60671 282 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 CLDN12P56749 244 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 ACKR1Q16570 336 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 SLC35D3Q5M8T2 416 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 LIPNQ5VXI9 398 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 RPL22L1Q6P5R6 122 aaKnown RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 FGD2Q7Z6J4 655 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 RGP1Q92546 391 aaPredicted RBP19.76■□□□□ 0.75
TPM4-201ENST00000300933 ELMOD3Q96FG2 381 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 OR10A4Q9H209 315 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 BRD7Q9NPI1 651 aa19.76■□□□□ 0.75
TPM4-201ENST00000300933 EIF4E2O60573 245 aaKnown RBP19.75■□□□□ 0.75
TPM4-201ENST00000300933 COQ8AQ8NI60 647 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 ZNF417Q8TAU3 575 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 EDAQ92838 391 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 ZNF587Q96SQ5 575 aaPredicted RBP19.75■□□□□ 0.75
TPM4-201ENST00000300933 ULBP3Q9BZM4 244 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 FKRPQ9H9S5 495 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 COPZ2Q9P299 210 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 BDP1A6H8Y1 2624 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 GMDSO60547 372 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 ZP3P21754 424 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 VEGFCP49767 419 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 FOXK1P85037 733 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 MEP1BQ16820 701 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 SFRP5Q5T4F7 317 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 C1orf140Q5VVS0 124 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 RABEPKQ7Z6M1 372 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 OR56B4Q8NH76 319 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 WDR89Q96FK6 387 aaPredicted RBP19.75■□□□□ 0.75
TPM4-201ENST00000300933 LRFN5Q96NI6 719 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 WDR77Q9BQA1 342 aaPredicted RBP19.75■□□□□ 0.75
TPM4-201ENST00000300933 CRB3Q9BUF7 120 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 REG4Q9BYZ8 158 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 KCNG2Q9UJ96 466 aa19.75■□□□□ 0.75
TPM4-201ENST00000300933 ZNF28P17035 718 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 HES5Q5TA89 166 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 C3P1Q6ZMU1 363 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 UBALD2Q8IYN6 164 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 OR5M1Q8NGP8 315 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 IFI44Q8TCB0 444 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 TGIF2Q9GZN2 237 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 LAMP5Q9UJQ1 280 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 A0A1W2PQD3 144 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 H3BML4 177 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 CXCL2P19875 107 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 POLR2HP52434 150 aaKnown RBP19.74■□□□□ 0.75
TPM4-201ENST00000300933 ISXQ2M1V0 245 aa19.74■□□□□ 0.75
TPM4-201ENST00000300933 NHLRC3Q5JS37 347 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms