RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 GLB1L2Q8IW92 636 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 OR5L2Q8NGL0 311 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 OR5D18Q8NGL1 313 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 FCAMRQ8WWV6 532 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 MVB12AQ96EY5 273 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 LRFN5Q96NI6 719 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 RBM24Q9BX46 236 aaKnown RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF160Q9HCG1 818 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SLC39A1Q9NY26 324 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF69Q9UC07 566 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 FBXL2Q9UKC9 423 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 HTR3EA5X5Y0 456 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SULT2B1O00204 365 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ARPC1BO15143 372 aaKnown RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 OR2T1O43869 369 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SLC43A1O75387 559 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF43P17038 809 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SLC2A5P22732 501 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 STARD6P59095 220 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 EFR3AQ14156 821 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 TRAM1Q15629 374 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 C9orf135Q5VTT2 229 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF101Q8IZC7 436 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SLC41A2Q96JW4 573 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 UBL7Q96S82 380 aaPredicted RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ABHD6Q9BV23 337 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 CYSLTR2Q9NS75 346 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ALKBH4Q9NXW9 302 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 EIF3KQ9UBQ5 218 aaKnown RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 TMEM14AQ9Y6G1 99 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 BLACEA4D250 179 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 HMX3A6NHT5 357 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 IFITM5A6NNB3 132 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 KDM4BO94953 1096 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 NPR2P20594 1047 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 HLA-DMAP28067 261 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 DCTDP32321 178 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 PITPNAQ00169 270 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 PLA2G7Q13093 441 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 WDR38Q5JTN6 314 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF782Q6ZMW2 699 aaPredicted RBP8.37□□□□□ -1.07
PRDM9-201ENST00000296682 MAMSTRQ6ZN01 415 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 OR2AJ1Q8NGZ0 328 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 ZC3HAV1LQ96H79 300 aaKnown RBP8.37□□□□□ -1.07
PRDM9-201ENST00000296682 GINS4Q9BRT9 223 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 PTGES2Q9H7Z7 377 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 HAO2Q9NYQ3 351 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 ROS1P08922 2347 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 FREM2Q5SZK8 3169 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 FITM1A5D6W6 292 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 CLPSP04118 112 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 YES1P07947 543 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 H2AFB2P0C5Z0 115 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 GTF2F2P13984 249 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 CDK2P24941 298 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 PTH2RP49190 550 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 EPHA4P54764 986 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 PCGF3Q3KNV8 242 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 GLYATL3Q5SZD4 288 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 LINC01590Q5TEZ4 76 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 GPR139Q6DWJ6 353 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 RHBDD2Q6NTF9 364 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 DMDP11532 3685 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 EML5Q05BV3 1969 aa8.37□□□□□ -1.07
PRDM9-201ENST00000296682 FAM25EA8MYX2 175 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 K7ESF4 209 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 FABP7O15540 132 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 PNPP00491 289 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TCRBP04435 133 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ASAH2BP0C7U1 165 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 JMJD7P0C870 316 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 FAM157BP0CG42 384 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TRAPPC2P0DI81 140 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TRAPPC2BP0DI82 140 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TCN2P20062 427 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 KLK2P20151 261 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 VEGFCP49767 419 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 RPS15P62841 145 aaKnown RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 INSM1Q01101 510 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 CHAF1BQ13112 559 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 CDONQ4KMG0 1287 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 B3GNTL1Q67FW5 361 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 YRDCQ86U90 279 aaKnown RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 NOXA1Q86UR1 476 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 C17orf82Q86X59 251 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ACBD4Q8NC06 268 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 AGBL5Q8NDL9 886 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 AKAP1Q92667 903 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 SEC22CQ9BRL7 303 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 AKAP7Q9P0M2 348 aaPredicted RBP8.36□□□□□ -1.07
PRDM9-201ENST00000296682 GMDSO60547 372 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 TSPAN2O60636 221 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 LMX1BO60663 402 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 WNT11O96014 354 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 ALOX5APP20292 161 aa8.36□□□□□ -1.07
PRDM9-201ENST00000296682 CCNOP22674 350 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms