RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.56□□□□□ -0.72
RHO-201ENST00000296271 C12orf10Q9HB07 376 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 HRASLSQ9HDD0 168 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 ELF5Q9UKW6 265 aaPredicted RBP10.56□□□□□ -0.72
RHO-201ENST00000296271 LRP12Q9Y561 859 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 FKBP7Q9Y680 259 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 G3V3Y1 287 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 CSRP1P21291 193 aaKnown RBP10.56□□□□□ -0.72
RHO-201ENST00000296271 VEGFCP49767 419 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 CCR9P51686 369 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 PUDPQ08623 228 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 MRPL28Q13084 256 aaKnown RBP10.56□□□□□ -0.72
RHO-201ENST00000296271 LPAL2Q16609 132 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
RHO-201ENST00000296271 TMEM205Q6UW68 189 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 KRT77Q7Z794 578 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 OR11G2Q8NGC1 345 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 C5orf34Q96MH7 638 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 CRB3Q9BUF7 120 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 TGIF2Q9GZN2 237 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 MED28Q9H204 178 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 CGGBP1Q9UFW8 167 aaPredicted RBP10.56□□□□□ -0.72
RHO-201ENST00000296271 EMC9Q9Y3B6 208 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 HSPB11Q9Y547 144 aa10.56□□□□□ -0.72
RHO-201ENST00000296271 TRBV5-7A0A0A0MS05 114 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 FAM172BPA6NC97 362 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 OR6C76A6NM76 312 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 TSC22D2O75157 780 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 ZNF254O75437 659 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 MT-ATP6P00846 226 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 CCL4P13236 92 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 PTGDSP41222 190 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 SLC26A5P58743 744 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 DCDP81605 110 aaKnown RBP10.55□□□□□ -0.72
RHO-201ENST00000296271 GSG1Q2KHT4 349 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 OR10K2Q6IF99 312 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 LYPD8Q6UX82 237 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 Q6ZTK2 550 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 KMT5CQ86Y97 462 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 OR4D10Q8NGI6 311 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 ADAMTS14Q8WXS8 1223 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 MRPL48Q96GC5 212 aaKnown RBP10.55□□□□□ -0.72
RHO-201ENST00000296271 RARRES3Q9UL19 164 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 A0A1B0GTQ1 180 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 PDCD5O14737 125 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 FOSL2P15408 326 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 TAS2R20P59543 309 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 EGR3Q06889 387 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 MFAP5Q13361 173 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 NR0B2Q15466 257 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 DCXRQ7Z4W1 244 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 KCTD20Q7Z5Y7 419 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
RHO-201ENST00000296271 ZNF679Q8IYX0 411 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 POC1BQ8TC44 478 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 GPR148Q8TDV2 347 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 MCHR2Q969V1 340 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 SEC22CQ9BRL7 303 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 COMMD4Q9H0A8 199 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 OR51J1Q9H342 316 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
RHO-201ENST00000296271 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 VSX1Q9NZR4 365 aaPredicted RBP10.55□□□□□ -0.72
RHO-201ENST00000296271 SRPK3Q9UPE1 567 aa10.55□□□□□ -0.72
RHO-201ENST00000296271 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 KHDRBS3O75525 346 aaKnown RBP10.54□□□□□ -0.72
RHO-201ENST00000296271 TOXO94900 526 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 C1QBP02746 253 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 H2AFB2P0C5Z0 115 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 ZP1P60852 638 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 PITPNAQ00169 270 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 TLE3Q04726 772 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 CARD17Q5XLA6 110 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 RNF144BQ7Z419 303 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
RHO-201ENST00000296271 RABEPKQ7Z6M1 372 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 CARFQ8N187 725 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 DEDD2Q8WXF8 326 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 S100A16Q96FQ6 103 aaKnown RBP10.54□□□□□ -0.72
RHO-201ENST00000296271 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 NDEL1Q9GZM8 345 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 C20orf85Q9H1P6 137 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 CENPMQ9NSP4 180 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 ING3Q9NXR8 418 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 C7orf66A4D0T2 115 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 ANKUB1A6NFN9 424 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 TMEM212A6NML5 194 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 MEN1O00255 615 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
RHO-201ENST00000296271 ALDOBP05062 364 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 CDAP32320 146 aa10.54□□□□□ -0.72
RHO-201ENST00000296271 SFTPDP35247 375 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms