RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SLC16A14Q7RTX9 510 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 C1QL2Q7Z5L3 287 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 KRT73Q86Y46 540 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 PTOV1Q86YD1 416 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 ARMC8Q8IUR7 673 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 LRRC18Q8N456 261 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SYT14Q8NB59 555 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 CPEB3Q8NE35 698 aaKnown RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SGMS2Q8NHU3 365 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 TAF15Q92804 592 aaKnown RBP eCLIP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF566Q969W8 418 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 TRIM44Q96DX7 344 aaPredicted RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SPDL1Q96EA4 605 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 DUX5Q96PT3 197 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 EBF4Q9BQW3 602 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 SPATA5L1Q9BVQ7 753 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 RBM4Q9BWF3 364 aaKnown RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 DCAF16Q9NXF7 216 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 CCDC167Q9P0B6 97 aa7.88□□□□□ -1.15
CNOT9-202ENST00000295701 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
CNOT9-202ENST00000295701 IGKV1D-43A0A0B4J1Z2 117 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 A0A0G2JMP0 313 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 A0A0X1KG70 313 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 M0QX08 132 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 CHP2O43745 196 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 OR6A2O95222 327 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 MT-ATP6P00846 226 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 MMP7P09237 267 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 PGA4P0DJD7 388 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 PGA3P0DJD8 388 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ANPEPP15144 967 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 GPX2P18283 190 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 CCNOP22674 350 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SLC6A2P23975 617 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ZFP36P26651 326 aaKnown RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 CDAP32320 146 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 WNT5AP41221 380 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 RAD52P43351 418 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SELENOVP59797 346 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 MAGOHP61326 146 aaKnown RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 UBA52P62987 128 aaKnown RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 LCN2P80188 198 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 THEM4Q5T1C6 240 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 TMEM53Q6P2H8 277 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 DLEU7Q6UYE1 221 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 RANBP3LQ86VV4 465 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SNX32Q86XE0 403 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 HIPK4Q8NE63 616 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 OR4M2Q8NGB6 313 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 OR1J1Q8NGS3 322 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 VANGL1Q8TAA9 524 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF519Q8TB69 540 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SNX33Q8WV41 574 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 C11orf40Q8WZ69 217 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 CCL17Q92583 94 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 MCHR2Q969V1 340 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ZMYND19Q96E35 227 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SLC25A44Q96H78 314 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF607Q96SK3 696 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 ARHGDIGQ99819 225 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 CPPED1Q9BRF8 314 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SUCNR1Q9BXA5 334 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 TMEM38AQ9H6F2 299 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 TCF7L2Q9NQB0 619 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 NKIRAS2Q9NYR9 191 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SLC13A4Q9UKG4 626 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 FBXL3Q9UKT7 428 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 SLC7A7Q9UM01 511 aa7.87□□□□□ -1.15
CNOT9-202ENST00000295701 LOC100509620A0A075B734 347 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 SLC22A23A1A5C7 686 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 PRORSD1PA6NEY8 169 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 CLDN25C9JDP6 229 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 BLOC1S5-TXNDC5H3BN57 136 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 TMPRSS2O15393 492 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 MGRN1O60291 552 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 SERPINB7O75635 380 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 TRMUO75648 421 aaKnown RBP7.86□□□□□ -1.15
CNOT9-202ENST00000295701 PRSS23O95084 383 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 SLC2A10O95528 541 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 BCL10O95999 233 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 FSHBP01225 129 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 IGHV1-46P01743 117 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 MRPL19P49406 292 aaKnown RBP7.86□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF81P51508 661 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
CNOT9-202ENST00000295701 CLRN1P58418 232 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 STX1BP61266 288 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 SCGB2A2Q13296 93 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 HIST3H3Q16695 136 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 TBC1D28Q2M2D7 210 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 AGKQ53H12 422 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 RUNDC3AQ59EK9 446 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 PABPC1L2AQ5JQF8 200 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
CNOT9-202ENST00000295701 TTC33Q6PID6 262 aaPredicted RBP7.86□□□□□ -1.15
CNOT9-202ENST00000295701 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms