RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CSNK1A1P48729 337 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 FOXG1P55316 489 aaPredicted RBP13.38□□□□□ -0.27
CCDC140-201ENST00000295226 RAP1BP61224 184 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 RAP1AP62834 184 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 OTPQ5XKR4 325 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 B3GLCTQ6Y288 498 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 AHSA2Q719I0 299 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 C20orf196Q8IYI0 205 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 NOXO1Q8NFA2 376 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 NSMAFQ92636 917 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 HTRA1Q92743 480 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 APH1AQ96BI3 265 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 ADAD1Q96M93 576 aaKnown RBP13.38□□□□□ -0.27
CCDC140-201ENST00000295226 ALKBH3Q96Q83 286 aaPredicted RBP13.38□□□□□ -0.27
CCDC140-201ENST00000295226 NAA50Q9GZZ1 169 aaKnown RBP13.38□□□□□ -0.27
CCDC140-201ENST00000295226 NUAK2Q9H093 628 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 OPN3Q9H1Y3 402 aaPredicted RBP13.38□□□□□ -0.27
CCDC140-201ENST00000295226 GP6Q9HCN6 339 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 PARPBPQ9NWS1 579 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 KLHL21Q9UJP4 597 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 RCE1Q9Y256 329 aa13.38□□□□□ -0.27
CCDC140-201ENST00000295226 QDPRP09417 244 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 BMP5P22003 454 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 CTSSP25774 331 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 PYCR1P32322 319 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 SNRPGP62308 76 aaKnown RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 MOGQ16653 247 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 RIPPLY2Q5TAB7 128 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 C9orf135Q5VTT2 229 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 P2RY8Q86VZ1 359 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ATCAYQ86WG3 371 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 OR6V1Q8N148 313 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 UBE2J2Q8N2K1 259 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 RND1Q92730 232 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 TMEM54Q969K7 222 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 MCHR2Q969V1 340 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 YIPF6Q96EC8 236 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 OR51V1Q9H2C8 321 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 SLCO5A1Q9H2Y9 848 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 GLTPQ9NZD2 209 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 VSX1Q9NZR4 365 aaPredicted RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 FOXD3Q9UJU5 478 aaPredicted RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 AKAP8O43823 692 aaKnown RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 SLC16A7O60669 478 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 RENP00797 406 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 CGAP01215 116 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 PIPP12273 146 aaPredicted RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 CTLA4P16410 223 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 OR3A2P47893 321 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 SMN1Q16637 294 aaKnown RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 TMEM211Q6ICI0 200 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 TFAP2EQ6VUC0 442 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ADCK1Q86TW2 530 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 LRR1Q96L50 414 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 PALMDQ9NP74 551 aa13.37□□□□□ -0.27
CCDC140-201ENST00000295226 ENTPD6O75354 484 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 KRT33AO76009 404 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 FADS2O95864 444 aaKnown RBP13.36□□□□□ -0.27
CCDC140-201ENST00000295226 PSMB9P28065 219 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 SERPINB10P48595 397 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 CENPAP49450 140 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 FAPQ12884 760 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 CTF1Q16619 201 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF829Q3KNS6 432 aaPredicted RBP13.36□□□□□ -0.27
CCDC140-201ENST00000295226 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 LYPD4Q6UWN0 246 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 SLC16A12Q6ZSM3 486 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 LUZP2Q86TE4 346 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 GPR137CQ8N3F9 429 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 STX19Q8N4C7 294 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 OR8J1Q8NGP2 316 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 OR6K3Q8NGY3 331 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 GGHQ92820 318 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 RBP7Q96R05 134 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 ALG12Q9BV10 488 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
CCDC140-201ENST00000295226 PRRG3Q9BZD7 231 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 PLSCR4Q9NRQ2 329 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 UPB1Q9UBR1 384 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 PROCRQ9UNN8 238 aa13.36□□□□□ -0.27
CCDC140-201ENST00000295226 HSPB2A8KAH6 182 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 CLPXO76031 633 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 MPZL1O95297 269 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 CRHP06850 196 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 CDAP32320 146 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 NUDT6P53370 316 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 HSPB2Q16082 182 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms