RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 ETFDHQ16134 617 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 LRRC36Q1X8D7 754 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 HIKESHIQ53FT3 197 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 KLHL24Q6TFL4 600 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 SLC22A24Q8N4F4 322 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 CYB561A3Q8NBI2 242 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 NABP1Q96AH0 204 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 TSSK2Q96PF2 358 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 SLC38A2Q96QD8 506 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 GRIP2Q9C0E4 1043 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 FN3KQ9H479 309 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
CCDC42-201ENST00000293845 SMPD3Q9NY59 655 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-201ENST00000293845 KCNN3Q9UGI6 736 aa11.58□□□□□ -0.56
CCDC42-201ENST00000293845 A0A096LPE4 126 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 A0A1W2PPZ6 126 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 DLGAP1O14490 977 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 FARS2O95363 451 aaKnown RBP11.57□□□□□ -0.56
CCDC42-201ENST00000293845 SNAP29O95721 258 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 CRYGSP22914 178 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 LAP3P28838 519 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 UBE2NP61088 152 aaKnown RBP11.57□□□□□ -0.56
CCDC42-201ENST00000293845 EFNB1P98172 346 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 PPA1Q15181 289 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 OR2T4Q8NH00 348 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 MUCL1Q96DR8 90 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 HRASLS5Q96KN8 279 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 MBOAT4Q96T53 435 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 PITX2Q99697 317 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 TOR3AQ9H497 397 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 SIAEQ9HAT2 523 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 MOV10Q9HCE1 1003 aaKnown RBP11.57□□□□□ -0.56
CCDC42-201ENST00000293845 POLE4Q9NR33 117 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 ZNF226Q9NYT6 803 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 ZNF224Q9NZL3 707 aa11.57□□□□□ -0.56
CCDC42-201ENST00000293845 A0A1W2PPL8 197 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 GOSR1O95249 250 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 ATP6V1G2O95670 118 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 WNT11O96014 354 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 GAAP10253 952 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 COX6B1P14854 86 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 MSR1P21757 451 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 PAICSP22234 425 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 CDAP32320 146 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 GLO1Q04760 184 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 SNAPC1Q16533 368 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 KCNMB1Q16558 191 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 DPPA2Q7Z7J5 298 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 GLB1L2Q8IW92 636 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 SKA3Q8IX90 412 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 FAM169BQ8N8A8 192 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 NANOS1Q8WY41 292 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 PTP4A1Q93096 173 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 ZC3HAV1LQ96H79 300 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 PLEKHA8Q96JA3 519 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 WACQ9BTA9 647 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 RERGLQ9H628 205 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 HINT3Q9NQE9 182 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 NDRG4Q9ULP0 352 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 COA3Q9Y2R0 106 aaPredicted RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
CCDC42-201ENST00000293845 RTTNQ86VV8 2226 aa11.56□□□□□ -0.56
CCDC42-201ENST00000293845 A0A1W2PR80 420 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 FAM183AA6NL82 134 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PRR23D1E9PI22 279 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 SLC16A6O15403 523 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PRKYO43930 277 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 UBL3O95164 117 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 IGKV3-15P01624 115 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PRR23D2P0DMB1 279 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 SPI1P17947 270 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 COL8A1P27658 744 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 GGT2P36268 569 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 GUCA1AP43080 201 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PTDSS1P48651 473 aaKnown RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 CENPAP49450 140 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 DAZAP2Q15038 168 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PLBD1Q6P4A8 553 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 WFDC8Q8IUA0 241 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 GALNT4Q8N4A0 578 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 SLC26A10Q8NG04 563 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 OR9Q1Q8NGQ5 310 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 NRG4Q8WWG1 115 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 HTRA1Q92743 480 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 HCAR1Q9BXC0 346 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 VCXQ9H320 206 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 SEC61A2Q9H9S3 476 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 NGBQ9NPG2 151 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 B3GNT2Q9NY97 397 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 NPAP1Q9NZP6 1156 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 CRNNQ9UBG3 495 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-201ENST00000293845 PLCE1Q9P212 2302 aa11.55□□□□□ -0.56
CCDC42-201ENST00000293845 CASKO14936 926 aa11.54□□□□□ -0.56
CCDC42-201ENST00000293845 PRODHO43272 600 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms