RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 COL8A2P25067 703 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 YAP1P46937 504 aaKnown RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 ZNF133P52736 654 aaPredicted RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 CLRN1P58418 232 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 ERVS71-1P61550 626 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SELENOWP63302 87 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SRSF2Q01130 221 aaKnown RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 FMODQ06828 376 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 FHL1Q13642 323 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 ALKBH6Q3KRA9 238 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 FAM120AOSQ5T036 256 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 FAM166AQ6J272 317 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 PGM2L1Q6PCE3 622 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SLC16A14Q7RTX9 510 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 VTCN1Q7Z7D3 282 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SLC15A3Q8IY34 581 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 MICU2Q8IYU8 434 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 LRRC18Q8N456 261 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 CLDN22Q8N7P3 220 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 PCYOX1LQ8NBM8 494 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 ZNF540Q8NDQ6 660 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SLC30A7Q8NEW0 376 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 OR2T12Q8NG77 320 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 HDAC2Q92769 488 aaKnown RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 TPD52L3Q96J77 140 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 TSPAN32Q96QS1 320 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 POLR2J2Q9GZM3 115 aaKnown RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SHARPINQ9H0F6 387 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 POLR2J3Q9H1A7 115 aaKnown RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 OR51B6Q9H340 312 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 MAN2C1Q9NTJ4 1040 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 GID8Q9NWU2 228 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 RHCGQ9UBD6 479 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SLC7A8Q9UHI5 535 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 DUSP13Q9UII6 198 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 FBXO9Q9UK97 447 aaPredicted RBP8.18□□□□□ -1.1
HMHB1-201ENST00000289448 KCNS2Q9ULS6 477 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 SPEF1Q9Y4P9 236 aa8.18□□□□□ -1.1
HMHB1-201ENST00000289448 ELOVL7A1L3X0 281 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 MCIDASD6RGH6 385 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 J3KTA2 159 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 WNT9BO14905 357 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 NCR1O76036 304 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 FARS2O95363 451 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 ATP6V1G2O95670 118 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 IFNA14P01570 189 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 ERCC1P07992 297 aaPredicted RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 THRBP10828 461 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 NAT2P11245 290 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 APEX1P27695 318 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 DAP3P51398 398 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 RPS23P62266 143 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 GALK2Q01415 458 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 SNCBQ16143 134 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 NRN1LQ496H8 165 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 C10orf128Q5T292 105 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 C8orf82Q6P1X6 216 aaPredicted RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 IGFN1Q86VF2 1251 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 LRRC75AQ8NAA5 344 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 CPEB3Q8NE35 698 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 GTF3AQ92664 365 aaKnown RBP8.17□□□□□ -1.1
HMHB1-201ENST00000289448 YIPF5Q969M3 257 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 NABP1Q96AH0 204 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 BPIFA2Q96DR5 249 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 RNF121Q9H920 327 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 LPAR3Q9UBY5 353 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 FBXL3Q9UKT7 428 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 HIF3AQ9Y2N7 669 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 MED31Q9Y3C7 131 aa8.17□□□□□ -1.1
HMHB1-201ENST00000289448 IGLV3-9A0A075B6K5 115 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 LOC100509620A0A075B734 347 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 TRAV27A0A087WT01 109 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 NPIPB13A6NJU9 1138 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 CENPBD1B2RD01 187 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 NPIPB4C9JG80 1138 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 NME4O00746 187 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 RP2O75695 350 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 PRSS23O95084 383 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 IFI30P13284 250 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ZNF250P15622 560 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ZNF26P17031 533 aaPredicted RBP8.16□□□□□ -1.1
HMHB1-201ENST00000289448 SRD5A1P18405 259 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 MAGEB1P43366 347 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ZNF84P51523 738 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 CHN2P52757 468 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 UCP2P55851 309 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ACTR3P61158 418 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 PSME3P61289 254 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 MRPS34P82930 218 aaKnown RBP8.16□□□□□ -1.1
HMHB1-201ENST00000289448 LIPEQ05469 1076 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ST3GAL3Q11203 375 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 TOP3AQ13472 1001 aaPredicted RBP8.16□□□□□ -1.1
HMHB1-201ENST00000289448 CCNIQ14094 377 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
HMHB1-201ENST00000289448 CR1LQ2VPA4 569 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 KRTAP24-1Q3LI83 254 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 SLC36A2Q495M3 483 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 SPATS1Q496A3 300 aa8.16□□□□□ -1.1
HMHB1-201ENST00000289448 ALG10Q5BKT4 473 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms