RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 GPRIN2O60269 458 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 DPP4P27487 766 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 MFGE8Q08431 387 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-201ENST00000279247 YIF1BQ5BJH7 314 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 DCXRQ7Z4W1 244 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 AKAP14Q86UN6 197 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 RAB43Q86YS6 212 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 GFI1Q99684 422 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 GAL3ST1Q99999 423 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 BEX2Q9BXY8 128 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 TRAV8-7A0A075B6U6 113 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 GATBO75879 557 aaKnown RBP16.06■□□□□ 0.16
CAPN1-201ENST00000279247 PTHLHP12272 177 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 CDAP32320 146 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 Q499Y3 187 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 OPN5Q6U736 354 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 TMPRSS12Q86WS5 348 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 CT55Q8WUE5 264 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 PPP1R14BQ96C90 147 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 CYSLTR2Q9NS75 346 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 TCFL5Q9UL49 500 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 MED13Q9UHV7 2174 aa16.06■□□□□ 0.16
CAPN1-201ENST00000279247 FAM240BA0A1B0GVZ2 78 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 SULT2B1O00204 365 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 KIR3DL2P43630 455 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 PITPNBP48739 271 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 EXT1Q16394 746 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 PLA2G2CQ5R387 149 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 STPG1Q5TH74 334 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 FCRLAQ7L513 359 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 PLCZ1Q86YW0 608 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF700Q9H0M5 742 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 VSX1Q9NZR4 365 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 MRPL15Q9P015 296 aaKnown RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 POLR1DQ9Y2S0 133 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 OR4C45A6NMZ5 311 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 GAAP10253 952 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 CD59P13987 128 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 CRABP1P29762 137 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 CD97P48960 835 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 DAP3P51398 398 aaKnown RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 OC90Q02509 493 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 SLC17A1Q14916 467 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 UEVLDQ8IX04 471 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 SETD6Q8TBK2 473 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 OR8B4Q96RC9 309 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 THAP7Q9BT49 309 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 LIN7BQ9HAP6 207 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 EMC9Q9Y3B6 208 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 MRPS18BQ9Y676 258 aaKnown RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 TRAV1-2A0A0B4J238 106 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 A0A0G2JMM0 328 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 A0A1W2PPB8 328 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 A0A1W2PRS3 328 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 KIR3DP1A8MWS1 328 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 MSX1P28360 303 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 MAP2K3P46734 347 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 SELENBP1Q13228 472 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 ASAH1Q13510 395 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 HYAL4Q2M3T9 481 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 SLC22A10Q63ZE4 541 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 C6orf15Q6UXA7 325 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-201ENST00000279247 NDUFAF7Q7L592 441 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 KCTD20Q7Z5Y7 419 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 UBQLNLQ8IYU4 475 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 ALKBH4Q9NXW9 302 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 FOXJ2Q9P0K8 574 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 LRP12Q9Y561 859 aa16.05■□□□□ 0.16
CAPN1-201ENST00000279247 DNAJC13O75165 2243 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 LYRM1O43325 122 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF208O43345 1280 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 FCER2P06734 321 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 NPR2P20594 1047 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 MFAP5Q13361 173 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 MFSD13AQ14CX5 517 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 C5orf46Q6UWT4 87 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 STAC2Q6ZMT1 411 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 ZNF679Q8IYX0 411 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 SOSTQ9BQB4 213 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 STRADBQ9C0K7 418 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 B3GAT1Q9P2W7 334 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 DKKL1Q9UK85 242 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 ANXA2P2A6NMY6 339 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 CCNKO75909 580 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 ANXA2P07355 339 aaKnown RBP16.04■□□□□ 0.16
CAPN1-201ENST00000279247 GP1BAP07359 652 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 CLRN1P58418 232 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 KCNK15Q9H427 330 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 V9GY05 133 aa16.04■□□□□ 0.16
CAPN1-201ENST00000279247 SLC43A1O75387 559 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 DKK1O94907 266 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 ADRA2CP18825 462 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 DGCR2P98153 550 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 EGR3Q06889 387 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 Q0VFX4 171 aa16.03■□□□□ 0.16
CAPN1-201ENST00000279247 PLET1Q6UQ28 207 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms