RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TEKQ02763 1124 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 GLO1Q04760 184 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 APOFQ13790 326 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 NRN1LQ496H8 165 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 SLC35D3Q5M8T2 416 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 C9orf135Q5VTT2 229 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 GID4Q8IVV7 300 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 GLB1L2Q8IW92 636 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 ZNF433Q8N7K0 673 aaPredicted RBP15.12■□□□□ 0.01
SKP2-201ENST00000274254 CNIH3Q8TBE1 160 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 KISS1RQ969F8 398 aaPredicted RBP15.12■□□□□ 0.01
SKP2-201ENST00000274254 BOD1Q96IK1 185 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 Q9H521 79 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 TMEM38BQ9NVV0 291 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 ELOVL5Q9NYP7 299 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
SKP2-201ENST00000274254 UBR5O95071 2799 aaPredicted RBP15.12■□□□□ 0.01
SKP2-201ENST00000274254 GLCEO94923 617 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 PSMB1P20618 241 aaKnown RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 LAP3P28838 519 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 CENPAP49450 140 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 MRPS34P82930 218 aaKnown RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 ARF1P84077 181 aaKnown RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 TGFBR3Q03167 851 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 CDK5R2Q13319 367 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 KLHL12Q53G59 568 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 SFRP5Q5T4F7 317 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 LAIR2Q6ISS4 152 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 STAC2Q6ZMT1 411 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 MEPCEQ7L2J0 689 aaKnown RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 CXorf67Q86X51 503 aaPredicted RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 C1orf162Q8NEQ5 155 aaPredicted RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 SLC26A10Q8NG04 563 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 NABP1Q96AH0 204 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 Q96MT0 163 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 TEAD3Q99594 435 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 CLN6Q9NWW5 311 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 GALNT8Q9NY28 637 aa15.11■□□□□ 0.01
SKP2-201ENST00000274254 H2AFY2Q9P0M6 372 aaPredicted RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 USP9XQ93008 2570 aaPredicted RBP15.11■□□□□ 0.01
SKP2-201ENST00000274254 FLNCQ14315 2725 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 WIPF3A6NGB9 483 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 SLC22A31A6NKX4 558 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 FAM90A27PA6NNH2 459 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 J3QKU1 62 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 LYZL6O75951 148 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 GPANK1O95872 356 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 NPR2P20594 1047 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 HTR1FP30939 366 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 BLVRAP53004 296 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 CDH11P55287 796 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 HSF2Q03933 536 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 OR1K1Q8NGR3 316 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 OR6K6Q8NGW6 343 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 RFKQ969G6 155 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 CNBD2Q96M20 576 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 FOXN4Q96NZ1 517 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 NELFAQ9H3P2 528 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 POLE4Q9NR33 117 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 MRPL22Q9NWU5 206 aaKnown RBP15.1■□□□□ 0.01
SKP2-201ENST00000274254 HAO2Q9NYQ3 351 aa15.1■□□□□ 0.01
SKP2-201ENST00000274254 DOPEY1Q5JWR5 2465 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 A0A1W2PPL8 197 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SH3D21A4FU49 640 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SEC14L2O76054 403 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 MPZL1O95297 269 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 TFP02787 698 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 HRGP04196 525 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SCG5P05408 212 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 B4GALT1P15291 398 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 GSTT1P30711 240 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 CD79BP40259 229 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SRSF1Q07955 248 aaKnown RBP eCLIP15.09■□□□□ 0.01
SKP2-201ENST00000274254 FAM27E3Q08E93 113 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 TMED1Q13445 227 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 KCNMB1Q16558 191 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SMN1Q16637 294 aaKnown RBP15.09■□□□□ 0.01
SKP2-201ENST00000274254 ANKRD16Q6P6B7 361 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 LYPD4Q6UWN0 246 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 B3GLCTQ6Y288 498 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 ZNF813Q6ZN06 617 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 ZNF511Q8NB15 262 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 HTRA1Q92743 480 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 BCL2L2Q92843 193 aaPredicted RBP15.09■□□□□ 0.01
SKP2-201ENST00000274254 HDHD5Q9BXW7 423 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 MARCH7Q9H992 704 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SEC61A2Q9H9S3 476 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 SIAEQ9HAT2 523 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 KCNJ16Q9NPI9 418 aa15.09■□□□□ 0.01
SKP2-201ENST00000274254 WARS2Q9UGM6 360 aaKnown RBP15.09■□□□□ 0.01
SKP2-201ENST00000274254 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.09■□□□□ 0.01
SKP2-201ENST00000274254 NKX2-6A6NCS4 301 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 SNTNA6NMZ2 147 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 RAD51DO75771 328 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 CLDN14O95500 239 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 OR8G3PP0DMU2 310 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 MSR1P21757 451 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 FMO3P31513 532 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 CCKARP32238 428 aa15.08■□□□□ 0.01
SKP2-201ENST00000274254 GUCA1AP43080 201 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms