RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 HINT3Q9NQE9 182 aaKnown RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 NKIRAS1Q9NYS0 192 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.6□□□□□ -1.19
TPM3-201ENST00000271850 ZNF229Q9UJW7 825 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 ANGPT4Q9Y264 503 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 WIPI2Q9Y4P8 454 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 TANC2Q9HCD6 1990 aa7.6□□□□□ -1.19
TPM3-201ENST00000271850 A0A0A6YYJ9 748 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 ZSCAN5BA6NJL1 495 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 FXYD1O00168 92 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 FBP2O00757 339 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 PAX4O43316 350 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 RNF13O43567 381 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 TRMUO75648 421 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 IGHV1-46P01743 117 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 PPIBP23284 216 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 ZFP36P26651 326 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 PCGF2P35227 344 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 AQP2P41181 271 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 UCP2P55851 309 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 KLF3P57682 345 aaPredicted RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 STX1BP61266 288 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 RBBP4Q09028 425 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 FHL1Q13642 323 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 NKPD1Q17RQ9 610 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 OXLD1Q5BKU9 147 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 SPATA46Q5T0L3 261 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 C10orf128Q5T292 105 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 ARMC4Q5T2S8 1044 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 FAHD2BQ6P2I3 314 aaPredicted RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 RFPL4BQ6ZWI9 263 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 USP51Q70EK9 711 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 USP43Q70EL4 1123 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 C1QL2Q7Z5L3 287 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 CROCCP2Q86T23 111 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 LRRC18Q8N456 261 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 SYT14Q8NB59 555 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 C11orf65Q8NCR3 313 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 MOSPD2Q8NHP6 518 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 SYNPRQ8TBG9 265 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 FAM216AQ8WUB2 273 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 TMEM255BQ8WV15 326 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 IPCEF1Q8WWN9 437 aaPredicted RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 HDAC2Q92769 488 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 DVL3Q92997 716 aaPredicted RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 THOC1Q96FV9 657 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 FAHD2AQ96GK7 314 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 MARS2Q96GW9 593 aaKnown RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 POM121L2Q96KW2 1035 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 C1orf147Q96MC9 270 aaPredicted RBP7.59□□□□□ -1.19
TPM3-201ENST00000271850 SLC6A7Q99884 636 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 ZNF416Q9BWM5 594 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 POFUT1Q9H488 388 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 NANSQ9NR45 359 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 NKIRAS2Q9NYR9 191 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 GRIP1Q9Y3R0 1128 aa7.59□□□□□ -1.19
TPM3-201ENST00000271850 TRAV20A0A0B4J274 112 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 IGHV1-69-2A0A0G2JMI3 117 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 TRAPPC13A5PLN9 417 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 SPRY1O43609 319 aaPredicted RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 PIP5K1CO60331 668 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 SHOX2O60902 331 aaPredicted RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 SERPINB7O75635 380 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 UBOX5O94941 541 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 MPZL1O95297 269 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 SCG5P05408 212 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 LCKP06239 509 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 ZNF32P17041 273 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 TSTQ16762 297 aaKnown RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 NRN1LQ496H8 165 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 PABPC1L2AQ5JQF8 200 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 TTC33Q6PID6 262 aaPredicted RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 UGT2A3Q6UWM9 527 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 ZNF771Q7L3S4 317 aaPredicted RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 SLC16A14Q7RTX9 510 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 CALHM3Q86XJ0 350 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 LRRC75AQ8NAA5 344 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 OR10A6Q8NH74 314 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 AKR7LQ8NHP1 331 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 ZNF519Q8TB69 540 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 TAF15Q92804 592 aaKnown RBP eCLIP7.58□□□□□ -1.2
TPM3-201ENST00000271850 C1QTNF5Q9BXJ0 243 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 SLC19A3Q9BZV2 496 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 WNT5BQ9H1J7 359 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 EVA1AQ9H8M9 152 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 SELENONQ9NZV5 590 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 LEF1Q9UJU2 399 aaPredicted RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 FBXL3Q9UKT7 428 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 ZNF346Q9UL40 294 aaKnown RBP7.58□□□□□ -1.2
TPM3-201ENST00000271850 PCDHB10Q9UN67 800 aa7.58□□□□□ -1.2
TPM3-201ENST00000271850 EVPLLA8MZ36 301 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 BLOC1S5-TXNDC5H3BN57 136 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 OR7A10O76100 309 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 BCL10O95999 233 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 NGFP01138 241 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 IGHG1P01857 330 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 MT-ND1P03886 318 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 ACADSP16219 412 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 PCMT1P22061 227 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms