RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 SPTBP11277 2137 aa10□□□□□ -0.81
MSH3-201ENST00000265081 A0A1B0GTH9 108 aa10□□□□□ -0.81
MSH3-201ENST00000265081 SLC25A12O75746 678 aa10□□□□□ -0.81
MSH3-201ENST00000265081 STOMP27105 288 aa10□□□□□ -0.81
MSH3-201ENST00000265081 ART1P52961 327 aa10□□□□□ -0.81
MSH3-201ENST00000265081 TAS2R20P59543 309 aa10□□□□□ -0.81
MSH3-201ENST00000265081 PUDPQ08623 228 aa10□□□□□ -0.81
MSH3-201ENST00000265081 FCN2Q15485 313 aa10□□□□□ -0.81
MSH3-201ENST00000265081 ST3GAL2Q16842 350 aa10□□□□□ -0.81
MSH3-201ENST00000265081 PRSS45Q7RTY3 260 aa10□□□□□ -0.81
MSH3-201ENST00000265081 GRPEL2Q8TAA5 225 aa10□□□□□ -0.81
MSH3-201ENST00000265081 ELP5Q8TE02 316 aa10□□□□□ -0.81
MSH3-201ENST00000265081 DUSP19Q8WTR2 217 aa10□□□□□ -0.81
MSH3-201ENST00000265081 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
MSH3-201ENST00000265081 YIPF2Q9BWQ6 316 aa10□□□□□ -0.81
MSH3-201ENST00000265081 SLITRK2Q9H156 845 aa10□□□□□ -0.81
MSH3-201ENST00000265081 OR51J1Q9H342 316 aa10□□□□□ -0.81
MSH3-201ENST00000265081 DDX28Q9NUL7 540 aaKnown RBP10□□□□□ -0.81
MSH3-201ENST00000265081 ALKBH4Q9NXW9 302 aa10□□□□□ -0.81
MSH3-201ENST00000265081 SLC17A2O00624 439 aa10□□□□□ -0.81
MSH3-201ENST00000265081 XKRYO14609 159 aa10□□□□□ -0.81
MSH3-201ENST00000265081 YKT6O15498 198 aa10□□□□□ -0.81
MSH3-201ENST00000265081 KRT33AO76009 404 aa10□□□□□ -0.81
MSH3-201ENST00000265081 MYF5P13349 255 aa10□□□□□ -0.81
MSH3-201ENST00000265081 DAP3P51398 398 aaKnown RBP10□□□□□ -0.81
MSH3-201ENST00000265081 FBXW4P57775 412 aa10□□□□□ -0.81
MSH3-201ENST00000265081 AP3S2P59780 193 aa10□□□□□ -0.81
MSH3-201ENST00000265081 DCDP81605 110 aaKnown RBP10□□□□□ -0.81
MSH3-201ENST00000265081 MFGE8Q08431 387 aaPredicted RBP10□□□□□ -0.81
MSH3-201ENST00000265081 CSRP2Q16527 193 aa10□□□□□ -0.81
MSH3-201ENST00000265081 LRRC69Q6ZNQ3 347 aa10□□□□□ -0.81
MSH3-201ENST00000265081 UBALD2Q8IYN6 164 aa10□□□□□ -0.81
MSH3-201ENST00000265081 ASB5Q8WWX0 329 aa10□□□□□ -0.81
MSH3-201ENST00000265081 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
MSH3-201ENST00000265081 MRGPRX4Q96LA9 322 aa10□□□□□ -0.81
MSH3-201ENST00000265081 CACNG6Q9BXT2 260 aa10□□□□□ -0.81
MSH3-201ENST00000265081 TCF7L1Q9HCS4 588 aa10□□□□□ -0.81
MSH3-201ENST00000265081 R4GMQ9 66 aa10□□□□□ -0.81
MSH3-201ENST00000265081 ACOT7O00154 380 aa10□□□□□ -0.81
MSH3-201ENST00000265081 PLA2G7Q13093 441 aa10□□□□□ -0.81
MSH3-201ENST00000265081 MEP1BQ16820 701 aa10□□□□□ -0.81
MSH3-201ENST00000265081 GUSBP11Q6P575 273 aa10□□□□□ -0.81
MSH3-201ENST00000265081 H1FNTQ75WM6 255 aaPredicted RBP10□□□□□ -0.81
MSH3-201ENST00000265081 RHOUQ7L0Q8 258 aa10□□□□□ -0.81
MSH3-201ENST00000265081 SPICQ8N5J4 248 aa10□□□□□ -0.81
MSH3-201ENST00000265081 BEX2Q9BXY8 128 aa10□□□□□ -0.81
MSH3-201ENST00000265081 SH2D2AQ9NP31 389 aa10□□□□□ -0.81
MSH3-201ENST00000265081 CHST11Q9NPF2 352 aa10□□□□□ -0.81
MSH3-201ENST00000265081 LRP12Q9Y561 859 aa10□□□□□ -0.81
MSH3-201ENST00000265081 A0A1B0GVI7 797 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 GMDSO60547 372 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 CTAG2O75638 210 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 IL5P05113 134 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 H2AFB2P0C5Z0 115 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 HLA-DOBP13765 273 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ARRB1P49407 418 aaPredicted RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 RIPPLY1Q0D2K3 151 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 DTX3Q8N9I9 347 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 TMEM106AQ96A25 262 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 MESP1Q9BRJ9 268 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ABHD6Q9BV23 337 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ELOVL3Q9HB03 270 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 H7C417 338 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 PEX14O75381 377 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 AHSA1O95433 338 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 MT-ND4P03905 459 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 GABRA1P14867 456 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 CCR6P51684 374 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ZNF133P52736 654 aaPredicted RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 CCL7P80098 99 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 GALK2Q01415 458 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 SNTB2Q13425 540 aaKnown RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 KCNMB1Q16558 191 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 C1orf100Q5SVJ3 147 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 CPEB2Q7Z5Q1 589 aaKnown RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 RNF133Q8WVZ7 376 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 SLX1AQ9BQ83 275 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 OR11A1Q9GZK7 315 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 RANBP3Q9H6Z4 567 aaPredicted RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 HEXA-AS1Q9H8Q6 139 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 MTFP1Q9UDX5 166 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ZNF107Q9UII5 783 aaPredicted RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 NTN3O00634 580 aaPredicted RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 ITGA5P08648 1049 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 LCN10Q6JVE6 187 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ZNF227Q86WZ6 799 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 CDH26Q8IXH8 852 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 ZNF671Q8TAW3 534 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 FCAMRQ8WWV6 532 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 DDIT4LQ96D03 193 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 B3GALT5Q9Y2C3 310 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
MSH3-201ENST00000265081 GOLGA4Q13439 2230 aaKnown RBP9.99□□□□□ -0.81
MSH3-201ENST00000265081 SLC16A7O60669 478 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 RPP14O95059 124 aaKnown RBP9.98□□□□□ -0.81
MSH3-201ENST00000265081 HEXBP07686 556 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 ITPKBP27987 946 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 GPR85P60893 370 aa9.98□□□□□ -0.81
MSH3-201ENST00000265081 GLO1Q04760 184 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms