RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 BET1O15155 118 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 WDR34Q96EX3 536 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 CCDC74BQ96LY2 380 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 RHNO1Q9BSD3 238 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 EMC7Q9NPA0 242 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 CHST2Q9Y4C5 530 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 LY75O60449 1722 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 TUBGCP6Q96RT7 1819 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 PIAS2O75928 621 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 OR2J2O76002 312 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 IGHV3-9P01782 118 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 COL9A1P20849 921 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 ACHEP22303 614 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 SELENBP1Q13228 472 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 TMEM92Q6UXU6 159 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 LANCL3Q6ZV70 420 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 OVCH1Q7RTY7 1134 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 AMER3Q8N944 861 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 RAB22AQ9UL26 194 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 FER1L6Q2WGJ9 1857 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 TPT1P13693 172 aaKnown RBP12.77□□□□□ -0.37
CDH3-201ENST00000264012 SFTPA1Q8IWL2 248 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 OR1J2Q8NGS2 313 aa12.77□□□□□ -0.37
CDH3-201ENST00000264012 TBX19O60806 448 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 NAGAP17050 411 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 RRAS2P62070 204 aaPredicted RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 RPS18P62269 152 aaKnown RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 SORDQ00796 357 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 FZD2Q14332 565 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 ANGPTL5Q86XS5 388 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 MAFIPQ8WZ33 124 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 SLCO5A1Q9H2Y9 848 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 MAGEB4O15481 346 aaPredicted RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 VHLLQ6RSH7 139 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 GLIPR1L1Q6UWM5 242 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 ZNF679Q8IYX0 411 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 SYS1Q8N2H4 156 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 FAM71CQ8NEG0 241 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 OR4N2Q8NGD1 307 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 LIPHQ8WWY8 451 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 APH1AQ96BI3 265 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 COX14Q96I36 57 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 ASH2LQ9UBL3 628 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 LOC107986453A0A1B0GWG9 222 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 SGCEO43556 437 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 SULT1B1O43704 296 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 QDPRP09417 244 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 GPR155Q7Z3F1 870 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 OPALINQ96PE5 141 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 CFHR5Q9BXR6 569 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 DYNLRB1Q9NP97 96 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 ANKRD31Q8N7Z5 1873 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 MSR1P21757 451 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 RPS27P42677 84 aaKnown RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 GABRA2P47869 451 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 CCR6P51684 374 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 TCTN1Q2MV58 587 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 DVL3Q92997 716 aaPredicted RBP12.76□□□□□ -0.37
CDH3-201ENST00000264012 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
CDH3-201ENST00000264012 HSPB6O14558 160 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 RAF1P04049 648 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TGFBR1P36897 503 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 CCR9P51686 369 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 RNF4P78317 190 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TMEM81Q6P7N7 255 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 HMGCLL1Q8TB92 370 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 WWTR1Q9GZV5 400 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 UNKLQ9H9P5 680 aaKnown RBP12.75□□□□□ -0.37
CDH3-201ENST00000264012 ISYNA1Q9NPH2 558 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 ATPIF1Q9UII2 106 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
CDH3-201ENST00000264012 PIGLQ9Y2B2 252 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 HRH3Q9Y5N1 445 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TRIP11Q15643 1979 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 SERTM1A2A2V5 107 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 M0QYG6 137 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
CDH3-201ENST00000264012 HLA-BQ31612 363 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 CORO6Q6QEF8 472 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 PRSS45Q7RTY3 260 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 OR2L13Q8N349 312 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 STK35Q8TDR2 534 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 C12orf49Q9H741 205 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 MED29Q9NX70 200 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 TEX51A0A1B0GUA7 166 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 SOD1P00441 154 aa12.75□□□□□ -0.37
CDH3-201ENST00000264012 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDH3-201ENST00000264012 PMPCAQ10713 525 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms